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Jan G. Bjaalie

Head of Institute
Image of Jan G. Bjaalie
Norwegian version of this page
Phone +47-22851575 +47-22851199
Mobile phone +47-91787901
Fax +47-22851493
Room 2118
Username
Visiting address Domus Medica Gaustad Sognsvannsveien 9 0372 Oslo
Postal address Institute of Basic Medical Sciences P.O. Box 1110 Blindern N-0317 Oslo

Academic interests

  • Neuroinformatics: from ontologies to cyberinfrastructure for data management and sharing
  • Brain architecture: next generation digital brain atlasing
  • Wiring patterns of the brain / brain connectivity
  • Map transformations in sensory systems of the brain

Background

Education

  • 1990: Ph.D., University of Oslo (neuroanatomy)
  • 1986: M.D., University of Oslo 

Positions held

  • 2009 - present: Head of Institute, Institute of Basic Medical Sciences, University of Oslo
  • 2009 - 2011: Senior advisor, International Neuroinformatics Coordinating Facility, Karolinska institutet, Stockholm, www.incf.org  www   
  • 2006 - 2008: Executive Director, International Neuroinformatics Coordinating Facility, Karolinska institutet, Stockholm
  • 2002 - present: Group leader of neuroinformatics, Centre for Molecular Biology and Neuroscience, University of Oslo
  • 1999: Visiting professor, University of Antwerp and Born Bounge Foundation, Antwerp
  • 1997 - present: Professor, Neural Systems and Graphics Computing Laboratory, Department of Anatomy, University of Oslo
  • 1992 - 1997: Associate Professor, Neural Systems and Graphics Computing Laboratory, Department of Anatomy, University of Oslo 
  • 1986 - 1991: Assistant Professor, Anatomical Institute, University of Oslo

Other professional activities

  • Founding Chief Editor: Frontiers in Neuroinformatic, Frontiers Research Foundation,www.frontiersin.org/neuroinformatics 
  • Associate Editor: Frontiers in Neuroscience, Frontiers Research Foundation, http://www.frontiersin.org/neuroscience 
  • Section Editor: Brain Structure and Function, Springer Verlag
  • Member of editorial boards of several journals, and special issue editor for Computational neuroanatomy (Anat. Embryol., 2001), Quantitative neuroanatomy (Neuroscience, 2004), and Neuroinformatics (Neural Networks, 2008)
  • Chair of the program committee for Neuroinformatics 2012 (INCF Congress), www.neuroinformatics2012.org
  • Member of the program committee for Neuroinformatics 2011 (INCF Congress), www.neuroinformatics2011.org
  • Chair of the Governing Board of the International Neuroinformatics Coordinating Facility (2013 - present)
  • Norwegian representative to the Governing Board of the International Neuroinformatics Coordinating Facility (2011 - present)
  • Member of The Society for Neuroscience Committee on Neuroinformatics (2004 - 2009)
  • Member of expert panel Neuroanatomy Ontology, National Institute of Health (2000-2001)
  • Norwegian delegate to OECD MegaScience Forum/Global Science Forum, Neuroinformatics working groups (1997 – 2002) 

Collaboration

  • Partner in UiO - Faculty of Medicine SERTA (Scientific Excellence Research Thematic Area): Healthy Brain Ageing (2013 - present)
  • Project manager for the Norwegian Node of the International Neuroinformatics Coordinating Facility (2011 - present)
  • Project coordinator: High Performance Computing for Neuroinformatics, NOTUR (2001 – 2004)ject coordinator, EU-US Task Force funded workshops: “Databasing the brain” (2001, 2006)Pxx
  • PpPProject coordinator, EU-US Task Force and EC Special Support Action workshops: “Databasing the brain” (2001, 2006)
  • Partner in Norwegian Centre of Excellence (Centre for Molecular Biology and Neuroscience) 2002 - 2012 
  • Partner in EU projects (Information transfer and computation in the cerebellum, Biotech, 1998-2001; Neuroinformatics and computational neuroscience in Europe, Thematic network,2000 – 2003; Computation and plasticity in the cerebellar system, Quality of Life, 2002-2004; Human Brain Project, ramp up phase 2013 - 2015)

 

Tags: Brain and nervous system, Neuroinformatics, Brain architecture, Digital brain atlasing, Life science

Publications

  • Kjonigsen LJ, Leergaard TB, Witter MP, Bjaalie JG. Digital atlas of anatomical subdivisions and boundaries of the rat hippocampal region.  Frontiers in Neuroinformatics, 2011; 5:2. doi: 10.3389/fninf.2011.00002
  • Odeh F, Leergaard TB, Boy J, Schmidt T, Riess O, Bjaalie JG. Atlas of transgenic Tet-Off Ca2+/calmodulin-dependent protein kinase II and prion protein promoter activity in the mouse brain. NeuroImage, 2011; 54 2603-11.
  • Hjornevik T, Leergaard TB, Darine D, Moldestad O, Dale AM, Willoch F, Bjaalie JG. Three-dimensional atlas system for mouse and rat brain imaging data. Frontiers in Neuroinformatics, 2007; 1:4 doi: 10.3389/neuro.11/004.2007.
  • Moene IA, Subramaniam S, Darine D, Leergaard TB, Bjaalie JG. Towards a workbench for rodent brain image data: systems architecture and design. Neuroinformatics 2007; 5: 35-58.
  • Boy J, Leergaard TB, Schmidt T, Odeh F, Bichelmeier U, Nuber S, Holzmann C, Wree A, Prusiner SB, Bujard HB, Riess O, Bjaalie JG. Expression mapping of tetracycline-responsive protein promoter: digital atlasing as a basis for generating cell-specific disease-models. NeuroImage 2006; 33: 449-462.
  • Bjaalie JG, Leergaard TB, Lillehaug S, Odeh F, Moene IA, Kjøde JO, Darine D. Database and tools for analysis of topographic organization and map transformations in major projection systems of the brain. Neuroscience 2005; 136:681-696.
  • Odeh F, Ackerley R, Bjaalie JG, Apps R. Pontine maps linking somatosensory and cerebellar cortices are in register with climbing fiber somatotopy. J Neurosci. 2005; 25: 5680-5690.
  • Bjaalie JG. Localization in the brain: new solutions emerging. Nature Rev Neurosci. 2002; 3:322-5.
  • Lillehaug, Sveinung; Syverstad, Gry-Helen Enger; Nilsson, Lars; Bjaalie, Jan G.; Leergaard, Trygve Brauns & Torp, Reidun (2014). Brainwide distribution and variance of amyloid-beta deposits in tg-ArcSwe mice. Neurobiology of Aging.  ISSN 0197-4580.  35(3), s 556- 564 . doi: 10.1016/j.neurobiolaging.2013.09.013
  • Papp, Eszter Agnes; Leergaard, Trygve Brauns; Calabrese, Evan; Johnson, G. Allan & Bjaalie, Jan G. (2014). Waxholm Space atlas of the Sprague Dawley rat brain. NeuroImage.  ISSN 1053-8119.  97, s 374- 386 . doi: 10.1016/j.neuroimage.2014.04.001
  • Zakiewicz, Izabela Maria; Bjaalie, Jan G. & Leergaard, Trygve Brauns (2014). Brain-wide map of efferent projections from rat barrel cortex. Frontiers in Neuroinformatics.  ISSN 1662-5196.  8 . doi: 10.3389/fninf.2014.00005
  • Hines, Kim Eigard; Bolle, Erlend; Rissi, Michael; Volgyes, David; Dorholt, Ole; Røhne, Ole Myren; Stapnes, Steinar; Bjaalie, Jan G. & Skretting, Arne (2013). COMPET: High resolution high sensitivity MRI compatible pre-clinical PET scanner. Nuclear Instruments and Methods in Physics Research Section A : Accelerators, Spectrometers, Detectors and Associated Equipment.  ISSN 0168-9002.  732, s 581- 585 . doi: 10.1016/j.nima.2013.05.148
  • Nagelhus, Erlend Arnulf; Amiry-Moghaddam, Mahmood; Bergersen, Linda Hildegard; Bjaalie, Jan G.; Eriksson, Jens; Gundersen, Vidar; Leergaard, Trygve Brauns; Morth, Jens Preben; Storm-Mathisen, Jon; Torp, Reidun; Walhovd, Kristine B & Tønjum, Tone (2013). The glia doctrine: Addressing the role of glial cells in healthy brain ageing. Mechanisms of Ageing and Development.  ISSN 0047-6374.  134(10), s 449- 459 . doi: 10.1016/j.mad.2013.10.001
  • Stensrud, Mats Julius; Chaudhry, Farrukh Abbas; Leergaard, Trygve Brauns; Bjaalie, Jan G. & Gundersen, Vidar (2013). Vesicular glutamate transporter-3 in the rodent brain: Vesicular colocalization with vesicular -aminobutyric acid transporter. Journal of Comparative Neurology.  ISSN 0021-9967.  521(13), s 3042- 3056 . doi: 10.1002/cne.23331
  • White, NS; Leergaard, Trygve Brauns; D'Arceuil, Helen; Bjaalie, Jan G. & Dale, AM (2013). Probing tissue microstructure with Restriction Spectrum Imaging: Histological and theoretical validation. Human Brain Mapping.  ISSN 1065-9471.  34(2), s 327- 346 . doi: 10.1002/hbm.21454
  • Rissi, Michael; Bolle, Erlend; Volgyes, David; Bjaalie, Jan G.; Dorholt, Ole; Hines, Kim Eigard; Røhne, Ole Myren; Skretting, Arne & Stapnes, Steinar (2012). Characterization of a high resolution and high sensitivity pre-clinical PET scanner with 3D event reconstruction. Nuclear Instruments and Methods in Physics Research Section A : Accelerators, Spectrometers, Detectors and Associated Equipment.  ISSN 0168-9002.  695, s 135- 138 . doi: 10.1016/j.nima.2011.10.042
  • Kjønigsen, Lisa Jannicke; Leergaard, Trygve Brauns; Witter, Menno & Bjaalie, Jan G. (2011). Digital atlas of anatomical subdivisions and boundaries of the rat hippocampal region. Frontiers in Neuroinformatics.  ISSN 1662-5196.  8(5) . doi: 10.3389/fninf.2011.00002
  • Odeh, U. R. Francis; Leergaard, Trygve Brauns; Boy, J.; Schmidt, T.; Riess, O. & Bjaalie, Jan G. (2011). Atlas of transgenic Tet-Off Ca2+/calmodulin-dependent protein kinase II and prion protein promoter activity in the mouse brain. NeuroImage.  ISSN 1053-8119.  54(4), s 2603- 2611 . doi: 10.1016/j.neuroimage.2010.11.032
  • Rissi, Michael; Bolle, Erlend; Buskenes, Jo Inge; Dorholt, Ole; Røhne, Ole Myren; Stapnes, Steinar; Bjaalie, Jan G. & Skretting, Arne (2011). COMPET – high resolution and high sensitivity PET scanner with novel readout concept: Setup and simulations. Nuclear Instruments and Methods in Physics Research Section A : Accelerators, Spectrometers, Detectors and Associated Equipment.  ISSN 0168-9002.  648, s S93- S95 . doi: 10.1016/j.nima.2010.12.097
  • Zakiewicz, Izabela Maria; Van Dongen, Yvette C; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2011). Workflow and Atlas System for Brain-Wide Mapping of Axonal Connectivity in Rat. PLoS ONE.  ISSN 1932-6203.  6(8) . doi: 10.1371/journal.pone.0022669
  • Leergaard, Trygve Brauns; White, Nathan; De Crespigny, Alex; Bolstad, Ingeborg; D'Arceuil, Helen; Bjaalie, Jan G. & Dale, Anders M (2010). Quantitative Histological Validation of Diffusion MRI Fiber Orientation Distributions in the Rat Brain. PLoS ONE.  ISSN 1932-6203.  5(1) . doi: 10.1371/journal.pone.0008595
  • Holmseth, Silvia; Scott, Heather A; Real, Katia; Lehre, Knut Petter Dæhlin; Leergaard, Trygve Brauns; Bjaalie, Jan G. & Danbolt, Niels Christian (2009). The concentrations and distributions of three C-terminal variants of the GLT1 (EAAT2; slc1a2) glutamate transporter protein in rat brain tissue suggest differential regulation. Neuroscience.  ISSN 0306-4522.  162(4), s 1055- 1071 . doi: 10.1016/j.neuroscience.2009.03.048
  • Kjønigsen, Lisa Jannicke; Leergaard, Trygve Brauns; Moene, Ivar Andre; Witter, Menno P & Bjaalie, Jan G. (2009). Interactive atlas of the rat hippocampus integrating high-resolution histological images and boundary definitions. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.neuro.11.2009.08.013
  • Papp, Eszter Agnes & Bjaalie, Jan G. (2009). Automatic detection of labelling patterns in microscopic sections: methods and workflows. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.neuro.11.2009.08.031
  • Zakiewicz, Izabela Maria; Van Dongen, Yvette C; Moene, Ivar Andre; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2009). Towards an interactive digital atlas system for exploring anatomical connectivity patterns in the entire rat brain.. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.neuro.11.2009.08.014
  • Bjaalie, Jan G. (2008). Understanding the Brain through Neuroinformatics . Frontiers in Neuroscience.  ISSN 1662-4548.  2(1), s 19- 21 . doi: 10.3389/neuro.01.022.2008.
  • Hjørnevik, Trine; Jacobsen, Line Melå; Qu, Hong; Bjaalie, Jan G.; Gjerstad, Johannes & Willoch, Frode (2008). Metabolic plasticity in the supraspinal pain modulating circuitry after noxious stimulus-induced spinal cord LTP. Pain.  ISSN 0304-3959.  140, s 456- 464 . doi: 10.1016/j.pain.2008.09.029
  • Hjørnevik, Trine; Leergaard, Trygve Brauns; Darine, Dmitri Aleksandrovitsj; Moldestad, Olve; Dale, Anders M; Willoch, Frode & Bjaalie, Jan G. (2007). Three-dimensional atlas system for mouse and rat brain imaging data. Frontiers in Neuroinformatics.  ISSN 1662-5196.  1 . doi: 10.3389/neuro.11/004.2007
  • Bolstad, Ingeborg; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2007). Branching of individual somatosensory cerebropontine axons in rat: evidence of divergence. Brain Structure and Function.  ISSN 1863-2653.  212, s 85- 93 . doi: 10.1007/s00429-007-0145-1
  • Leergaard, Trygve Brauns & Bjaalie, Jan G. (2007). Topography of the complete corticopontine projection: from experiments to principal maps. Frontiers in Neuroscience.  ISSN 1662-4548.  1(1), s 211- 223
  • Moene, Ivar Andre; Subramaniam, S; Darine, Dmitri Aleksandrovitsj; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2007). Toward a workbench for rodent brain image data - Systems architecture and design. Neuroinformatics.  ISSN 1539-2791.  5 . doi: 10.1385/NI:5:1:35
  • Bjaalie, Jan G. & Leergaard, Trygve Brauns (2006). Three-dimensional computerized reconstruction from serial sections: cells populations, regions, and whole brain., In L. Záborszky; F. Wouterlood & J.L. Lanciego (ed.),  Neuroanatomical Tract Tracing: Molecules, Neurons, & Systems.  Springer Science+Business Media B.V..  ISBN 0-387-28941-0.  17.  s 530 - 565
  • Bjaalie, Jan G.; Leergaard, Trygve Brauns & Pettersen, Christian (2006). Micro3D: Computer program for three-dimensional reconstruction, visualization, and analysis of neuronal populations and brain regions. International Journal of Neuroscience.  ISSN 0020-7454.  116, s 515- +
  • Boy, J.; Leergaard, Trygve Brauns; Schmidt, T.; Odeh, U. R. Francis; Bichelmeier, U.; Nuber, S.; Holzmann, C.; Wree, A.; Prusiner, S.; Bujard, H.B.; Riess, O. & Bjaalie, Jan G. (2006). Expression mapping of tetracycline-responsive protein promoter: digital atlasing as a basis for generating cell-specific disease-models.. NeuroImage.  ISSN 1053-8119.  33(2), s 449- 462
  • Leergaard, Trygve Brauns; Lillehaug, Sveinung; De Schutter, E.; Bower, J.M. & Bjaalie, Jan G. (2006). Anatomical organization of somatosensory pathways from primary somatosensory cortex via the pontine nuclei to cerebellar folium crus IIa in rat.. European Journal of Neuroscience.  ISSN 0953-816X.  24(10), s 2801- 2812
  • Leergaard, Trygve Brauns; Lillehaug, Sveinung; De Schutter, Erik; Bower, James M. & Bjaalie, Jan G. (2006). Topographical organization of pathways from somatosensory cortex through the pontine nuclei to tactile regions of the rat cerebellar hemispheres. European Journal of Neuroscience.  ISSN 0953-816X.  24, s 2801- 2812
  • Bjaalie, Jan G.; Leergaard, Trygve Brauns; Lillehaug, Sveinung; Odeh, U. R. Francis; Moene, Ivar Andre; Kjøde, Jan Olav & Darine, Dmitri Aleksandrovitsj (2005). Database and tools for analysis of topographic organization and map transformations in major projection systems of the brain . Neuroscience.  ISSN 0306-4522.  136, s 681- 696
  • Odeh, U. R. Francis; Ackerley, R; Bjaalie, Jan G. & Apps, R (2005). Pontine maps linking somatosensory and cerebellar cortices are in register with climbing fiber somatotopy . Journal of Neuroscience.  ISSN 0270-6474.  25, s 5680- 5690
  • Zaborskszky, L; Buhl, DL; Pobalashingham, S; Somogyi, J.; Bjaalie, Jan G. & Nadasdy, Z. (2005). Three-dimensional chemoarcitecture of the basal forebrain: spatially specific clusters of cholinergic and calcium binding protein-containing neurons. Neuroscience.  ISSN 0306-4522.  135, s 697- 714
  • Berg, Bente Gunnveig; Almaas, Tor Jørgen; Bjålie, Jan Gunnar; Mustaparta, Hanna & Bjaalie, Jan G (2005). Projections of male-specific receptor neurons in the antennal lobe of the oriental tobacco budworm moth, Helicoverpa assulta: A unique glomerular organization among related species. Journal of Comparative Neurology.  ISSN 0021-9967.  486, s 209- 220

View all works in Cristin

  • Sand, Olav; Sjaastad, Øystein; Haug, Egil & Bjaalie, Jan G. (2006). Menneskekroppen - Fysiologi og anatomi 2. utgave. Gyldendal Akademisk.  ISBN 8205348073.  544 s.
  • Sjaastad, Øystein V.; Toverud, Kari C.; Sand, Olav; Bjaalie, Jan G. & Haug, Egil (2006). Arbeidsbok til menneskekroppen - Fysiologi og anatomi. Gyldendal Akademisk.  ISBN 978-82-05-34808-0.  203 s.
  • Bjaalie, Jan G. & Leergaard, Trygve Brauns (2005). Three-dimensional visualization and analysis of wiring patterns in the brain: experiments, tools, models, and databases. John Wiley & Sons.  25 s.

View all works in Cristin

  • Bjaalie, Jan G.; Papp, Eszter Agnes; Kjonigsen, LJ; Johnson, GA; Witter, Menno & Leergaard, Trygve Brauns (2013). Waxholm Space Atlas of the rat brain with detailed hippocampal subdivisions.
  • Papp, Eszter Agnes; Leergaard, Trygve Brauns; Johnson, G. Allan & Bjaalie, Jan G. (2012). First generation Waxholm atlas of the Sprague-Dawley rat brain .
  • Kjønigsen, Lisa Jannicke; Leergaard, Trygve Brauns; Witter, Menno & Bjaalie, Jan G. (2011). Three-dimensional atlas framework for mapping of projections from the entorhinal cortex to the hippocampal formation in rat. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.fninf.2011.08.00129
  • Moene, Ivar Andre; Darine, Dmitri Aleksandrovitsj; Ramachandran, Muthuraja; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2011). Rodent Brain Navigator: database and atlas system for microscopy and imaging data. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.fninf.2011.08.00159
  • Papp, Eszter Agnes; Leergaard, Trygve B.; Jiang, Yi; Johnson, G. Allan & Bjaalie, Jan G. (2011). Multimodal digital atlas of the rat brain: data integration in a high resolution volumetric template. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.fninf.2011.08.00013
  • Zakiewicz, Izabela Maria; Bjaalie, Jan G. & Leergaard, Trygve Brauns (2011). Neuroinformatics web applications for 3-D analysis of brain connectivity: anatomical organization of subcortical projections from whisker and forelimb regions of the rat somatosensory cortex. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.fninf.2011.08.00060
  • Van Dongen, Yvette C; Molvær, Arnold JN; van Camp, Nadja; Blockx, I; Urbach, Yvonne K; Raber, Kerstin; Van Der Linden, A; von Hörsten, Stephan; Bjaalie, Jan G. & Leergaard, Trygve Brauns (2010). Structural analysis of the cortico-basal ganglia connectivity in a transgenic rat model of Huntington's disease.
  • Van Dongen, Yvette C; Molvær, Arnold John Ngugi; Van Camp, Nadja; Blockx, I; Urbach, Yvonne K; Raber, Kerstin; Van Der Linden, A; von Hörsten, Stephan; Bjaalie, Jan G. & Leergaard, Trygve Brauns (2010). Reduced corticostriatal but intact striatofugal projections in transgenic rat model of Huntington's disease.
  • Zakiewicz, Izabela Maria; Van Dongen, Yvette C; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2010). Workflow and database system for brain-wide mapping of axonal connectivity in rat.
  • Melsom, Caroline B.; Leergaard, Trygve Brauns; Darine, Dmitri Aleksandrovitsj; Dale, Anders M & Bjaalie, Jan G. (2009). Three-dimensional visualization of rat corticofugal axonal trajectories using manganese enhanced magnetic resonance imaging and digital atlasing. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.neuro.11.2009.08.027
  • Boy, J.; Schmidt, T.; Bottcher, M; Schumann, U.; Leergaard, Trygve Brauns; Odeh, Francis; Wolburg, H; Nuber, S.; Holzmann, C.; Schmitt, I; Zimmermann, F; Bjaalie, Jan G. & Riess, O. (2009). Clinical symptoms in SCA3 are reversible: a study using an inducible mouse model of SCA3. Journal of Neurochemistry.  ISSN 0022-3042.  110, s 97- 97
  • Haselgrove, C; Larsson, A; Bjaalie, Jan G.; Breeze, J; Buccigrossi, R; Kennedy, D; Preuss, N & Ritz, R (2009). Data Sharing Between NITRC and the INCF Software Center. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.neuro.11.2009.08.075
  • Hjornevik, Trine; Qu, Hong; Gjerstad, J; Jacobsen, Line Melå; Bjaalie, Jan G. & Willoch, Frode (2009). Rat model of pathological pain in the central nervous system. Journal of Neurochemistry.  ISSN 0022-3042.  109, s 309- 309
  • Kjønigsen, Lisa Jannicke; Leergaard, Trygve Brauns; Bjaalie, Jan G. & Witter, Menno P (2009). Interactive Resource for Cytoarchitectonic Delineation of the Rat Hippocampus Formation and Associated Parahippocampal Cortex.
  • Odeh, U. R. Francis; Schmidt, T.; Boy, J.; Moene, Ivar Andre; Riess, O.; Bjaalie, Jan G. & Leergaard, Trygve Brauns (2009). Interactive mouse brain atlas of tetracycline-responsive calmodulin-dependent protein kinase II- and prion protein promoter expression.. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.neuro.11.2009.08.012
  • Zakiewicz, Izabela Maria; Van Dongen, Yvette C; Moene, Ivar Andre; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2009). Towards an interactive digital atlas system for exploring anatomical connectivity patterns in the entire rat brain.
  • White, Nathan; Leergaard, Trygve Brauns; Bolstad, Ingeborg; Bjaalie, Jan G.; D'Arceuil, Helen; De Crespigny, Alex & Dale, Anders M. (2008). Quantitative histological validation of fiber orientation distributions based on high-angular resolution diffusion imaging.
  • Bjaalie, Jan G.; Grillner, S & Usui, S (2008). Neuroinformatics: Databases, tools, and computational modeling for studying the nervous system. Neural Networks.  ISSN 0893-6080.  21(8), s 1045- 1046 . doi: 10.1016/j.neunet.2008.08.003
  • Hjørnevik, Trine; Darine, Dmitri Aleksandrovitsj; Qu, Hong; Willoch, Frode; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2008). Three dimensional atlas system for mouse and rat brain imaging data.
  • Hjørnevik, Trine; Jacobsen, Line Melå; Qu, Hong; Bjaalie, Jan G.; Gjerstad, Johannes & Willoch, Frode (2008). Induction of spinal LTP results in activity-dependent plastic changes in pain modulatory of brain and brain stem.
  • Hjørnevik, Trine; Qu, Hong; Gjerstad, Johannes; Jacobsen, Line Melå; Bjaalie, Jan G. & Willoch, Frode (2008). Rat model of pathological pain in the central nervous system.
  • Kjøde, Jan Olav; Darine, Dmitri Aleksandrovitsj; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2008). Database application for managementof microscopic images.
  • Kjønigsen, Lisa Jannicke; Leergaard, Trygve Brauns; Kjøde, Jan Olav; Witter, Menno P & Bjaalie, Jan G. (2008). Interactive histological atlas system for anatomical parcellation of the rat hippocampus proper, fasciola and associated parahippocampal cortex.
  • Zakiewicz, Izabela Maria; Dongen, Yvette C Van; Kjøde, Jan Olav; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2008). Digital atlas system for exploring axonal connections throughout the rat brain.
  • Zakiewicz, Izabela Maria; Van Dongen, Yvette C; Kjode, Jan Olav; Bore, A T; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2008). Interactive microscopy via the web:exploring the neural network connections of the rat somatosensory cortex.
  • Zakiewicz, Izabela Maria; Van Dongen, Yvette C; Kjode, Jan Olav; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2008). Digital atlas system for exploring axonal connections throughout the rat brain.
  • Zakiewicz, Izabela Maria; Van Dongen, Yvette C; Kjode, Jan Olav; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2008). Digital atlas system for exploring axonal connections throughout the rat brain. Frontiers in Neuroinformatics.  ISSN 1662-5196. . doi: 10.3389/conf.neuro.11.2008.01.053
  • Bjaalie, Jan G. (2007). Analyzing rodent brain circuitry and molecular distribution patterns: atlases, coordinates, and databases.
  • Bjaalie, Jan G. (2007). Visualization of brain anatomy.
  • Dongen, Yvette C Van; Leergaard, Trygve Brauns; Bolstad, Ingeborg; Kjøde, Jan Olav & Bjaalie, Jan G. (2007). Towards a digital atlas system for tracing axonal connectivity in the entire rat brain.
  • Hjørnevik, Trine; Leergaard, Trygve Brauns; Darine, Dmitri Aleksandrovitsj; Qu, Hong; Willoch, Frode & Bjaalie, Jan G. (2007). Three-dimensional atlas system for mouse and rat brain imaging data.
  • Hjørnevik, Trine; Pettersen, Christian; Darine, Dmitri Aleksandrovitsj; Leergaard, Trygve Brauns; Willoch, Frode & Bjaalie, Jan G. (2007). 3-D digital rodent brain atlas.
  • Hjørnevik, Trine; Qu, Hong; Gjerstad, Johannes; Jacobsen, Line; Schoultz, Bent Wilhelm; Henriksen, Gjermund; Bjaalie, Jan G. & Willoch, Frode (2007). 18F FDG PET Measurement of long-term potentiation in rat brain.
  • Leergaard, Trygve Brauns & Bjaalie, Jan G. (2007). Navigating the rodent brain: Towards an integrative framework for visualization and analysis of histological and tomographic image data.
  • Qu, Hong; Hjørnevik, Trine; Bjaalie, Jan G. & Willoch, Frode (2007). microPET in preclinical research-summary of two years' learning.
  • Van Dongen, Yvette C; Leergaard, Trygve Brauns; Bolstad, Ingeborg; Kjode, Jan Olav & Bjaalie, Jan G. (2007). Towards a digital atlas system for tracing axonal connectivity in the entire rat brain.
  • Bjaalie, Jan G. (2006, 30. august). En følelse i magen?. [TV].  NRK Schrødingers Katt.
  • Bjaalie, Jan G. (2006). Neuro-IT links with the INCF.
  • Bjaalie, Jan G. (2006). Neuroinformatics – databases and modeling! INCF – short and long term goals.
  • Bjaalie, Jan G. (2006). Rodent Brain Navigator: database and atlas system for microscopy and imaging data.
  • Bjaalie, Jan G. (2006). Towards a workbench for rodent brain image data: systems architecture and design.
  • Bjaalie, Jan G. (2006). Understanding cerebro-cerebellar communication: contributions from anatomy of brain map transformations.
  • Bjaalie, Jan G. (2006). Understanding the brain: international coordination in neuroinformatics.
  • Bjaalie, Jan G.; Kjøde, Jan Olav; Hjørnevik, Trine; Leergaard, Trygve Brauns; Darine, Dmitri Aleksandrovitsj; Pettersen, Christian & Moene, Ivar Andre (2006). Rodent Brain Navigator: database and atlas system for microscopy and imaging data.
  • Bjaalie, Jan G. & Zilles, K (2006). New article category in anatomy and embryology: Methodological standards. Anatomy and Embryology.  ISSN 0340-2061.  211, s 255- 255
  • Davidsen, Tonje; Castellanos, Cesilie Granum; Frye, Stephan Alfons; Nagelhus, Erlend Arnulf; Bjaalie, Jan G.; Ottersen, Ole Petter & Tønjum, Tone (2006). Glial and neuronal responses to meningococcal meningitis.
  • Davidsen, Tonje; Castellanos, Cesilie Granum; Qu, Hong; Nagelhus, Erlend Arnulf; Bjaalie, Jan G.; Ottersen, Ole Petter & Tønjum, Tone (2006). Glial and neuronal responses to meningococcal meningitis.
  • Bjaalie, Jan G. (2005). FACCS: Functional Anatomy of the Cerebro-Cerebellar System . [www ].
  • Bjaalie, Jan G. (2005). Hjernens funksjon – tenkning, følelser og adferd .
  • Bjaalie, Jan G. (2005, 16. desember). Jakten på hjernens kjøpesenter .  A-magasinet, Aftenposten.
  • Bjaalie, Jan G. (2005). Three-dimensional rodent brain atlasing: centralized and distributed approaches.
  • Bjaalie, Jan G. & Leergaard, Trygve Brauns (2005). Exploring the architecture of macrocircuits in the brain: experiments, databases and tools .
  • Bjaalie, Jan G.; Leergaard, Trygve Brauns & Moene, Ivar Andre (2005). Neuroinformatics database for visualization and analysis of anatomical data from the rat brain.
  • Leergaard, Trygve Brauns & Bjaalie, Jan G. (2005). Integrative properties of the pontine nuclei: exploring the architecture of pathways from somatosensory cortex to the cerebellum with use of a database application.
  • Malmierca, MS; Bjaalie, Jan G. & Mugnaini, E (2005). Theodor W. Blackstad (1925–2003): a pioneer in quantitative neuroanatomy. Neuroscience.  ISSN 0306-4522.  136, s 601- 606
  • Bjaalie, Jan G. (2005). Global Neurinformatics: The International Neuroinformatics Coordinating Facility.
  • Ackerley, R; Odeh, F; Bjaalie, Jan G. & Apps, R (2004). Ponto-cerebellar projections and their congruence to climbing fibre zones in the rat.
  • Bjaalie, Jan G. (2004). Brain imaging and neuroinformatics: Who said eScience?.
  • Bjaalie, Jan G. (2004). Coordinate-Based Databases for Neuroanatomical Data: Database of Connections from Cerebral Cortex to Cerebellum in Rat.
  • Bjaalie, Jan G. (2004). Databases of brain systems and connectivity.
  • Bjaalie, Jan G. (2004). Digital brain atlasing: the marriage of neuroinformatics and eSciences.
  • Bjaalie, Jan G. (2004). Digital navigation and databasing: the eScience route for exploring the cerebellar system .
  • Bjaalie, Jan G. (2004). Functions of the cerebellum: who should we believe?.
  • Bjaalie, Jan G. (2004). High Performance Computing for Computational Neuroanatomy and Neuroinformatics: Results of TTP-project NEUROINF .
  • Bjaalie, Jan G. (2004). Introduction .

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Published Apr 13, 2011 02:40 PM - Last modified Dec 3, 2013 11:13 AM

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