Beshkov, Kosio; Fyhn, Marianne; Hafting, Torkel & Einevoll, Gaute Tomas
(2023).
Topological Structure of Population Activity in Mouse Visual Cortex Encodes Densely Sampled Visual Scene Rotations.
Social Science Research Network (SSRN).
ISSN 1556-5068.
doi: 10.2139/ssrn.4495668.
Lepperød, Mikkel Elle; Stöber, Tristan Manfred; Hafting, Torkel; Fyhn, Marianne & Kording, Konrad Paul
(2023).
Inferring causal connectivity from pairwise recordings and optogenetics.
PLoS Computational Biology.
ISSN 1553-734X.
19(11).
doi: 10.1371/journal.pcbi.1011574.
Full text in Research Archive
Hanssen, Kine Ødegård; Grødem, Sverre; Fyhn, Marianne; Hafting, Torkel; Einevoll, Gaute & Ness, Torbjørn Vefferstad
[Show all 7 contributors for this article](2022).
Effects of perineuronal nets on neural ring properties.
Research Square.
ISSN 2693-5015.
doi: 10.21203/rs.3.rs-2198467/v1.
Hippocampal region CA2 has received increased attention due to its importance in social recognition memory. While its specific function remains to be identified, there are indications that CA2 plays a major role in a variety of situations, widely extending beyond social memory. In this targeted review, we highlight lines of research which have begun to converge on a more fundamental role for CA2 in hippocampus-dependent memory processing. We discuss recent proposals that speak to the computations CA2 may perform within the hippocampal circuit.
Lepperød, Mikkel Elle; Christensen, Ane Charlotte; Lensjø, Kristian Kinden; Buccino, Alessio Paolo; Yu, Jai & Fyhn, Marianne
[Show all 7 contributors for this article](2021).
Optogenetic pacing of medial septum parvalbumin-positive cells disrupts temporal but not spatial firing in grid cells.
Science Advances.
ISSN 2375-2548.
7(19).
doi: 10.1126/sciadv.abd5684.
Full text in Research Archive
Stöber, Tristan Manfred; Lehr, Andrew B; Hafting, Torkel; Kumar, Arvind & Fyhn, Marianne
(2020).
Selective neuromodulation and mutual inhibition within the CA3-CA2 system can prioritize sequences for replay.
Hippocampus.
ISSN 1050-9631.
doi: 10.1002/hipo.23256.
Full text in Research Archive
As experimental neuroscience is moving toward more integrative approaches, with a variety of acquisition techniques covering multiple spatiotemporal scales, data management is becoming increasingly challenging for neuroscience laboratories. Often, datasets are too large to practically be stored on a laptop or a workstation. The ability to query metadata collections without retrieving complete datasets is therefore critical to efficiently perform new analyses and explore the data. At the same time, new experimental paradigms lead to constantly changing specifications for the metadata to be stored. Despite this, there is currently a serious lack of agile software tools for data management in neuroscience laboratories. To meet this need, we have developed Expipe, a lightweight data management framework that simplifies the steps from experiment to data analysis. Expipe provides the functionality to store and organize experimental data and metadata for easy retrieval in exploration and analysis throughout the experimental pipeline. It is flexible in terms of defining the metadata to store and aims to solve the storage and retrieval challenges of data/metadata due to ever changing experimental pipelines. Due to its simplicity and lightweight design, we envision Expipe as an easy-to-use data management solution for experimental laboratories, that can improve provenance, reproducibility, and sharing of scientific projects.
Beshkov, Kosio; Fyhn, Marianne; Hafting, Torkel & Einevoll, Gaute Tomas
(2023).
Topological Structure of Population Activity in Mouse Visual Cortex Encodes Densely Sampled Visual Scene Rotations.
Beshkov, Kosio; Fyhn, Marianne; Hafting, Torkel & Einevoll, Gaute Tomas
(2023).
Topological Structure of Population Activity in Mouse Visual Cortex Encodes Densely Sampled Visual Scene Rotations.
Elle Lepperød, Mikkel; Stöber, Tristan; Hafting, Torkel; Fyhn, Marianne & Kording, Konrad
(2022).
Inferring causal connectivity from pairwise recordings and optogenetics.
bioRxiv.
ISSN 2692-8205.
doi: 10.1101/463760.
Annavini, Eis; Korchynska, Solomiia; Babursah, Ela; Hafting, Torkel & Boccara, Charlotte
(2022).
A benchmark for sharp wave-ripple detection algorithms.
Thon, Sarah Kriebel; Christensen, Ane Charlotte; Fjeldstad, Maria P; Schøyen, Vemund Sigmundson; Olsen, Elise Reppe & Lepperød, Mikkel Elle
[Show all 8 contributors for this article](2022).
Social and spatial codes in hippocampus CA2 and entorhinal cortex.
Sørensen, Christina; Qureshi, Tayyaba; Fyhn, Marianne; Hafting, Torkel & Chaudhry, Farrukh Abbas
(2021).
GABA er essensielt for normal hjerneutvikling og synaptisk plastisitet.
NBS-nytt.
ISSN 0801-3535.
Hafting, Torkel
(2021).
Dissociation between theta oscillations and the spatial code of grid cells.
Røe, Malin Benum; Aasebø, Ida Elisabeth Jørgensen; Mobarhan, Milad; Lensjø, Kristian Kinden; Einevoll, Gaute & Hafting, Torkel
[Show all 7 contributors for this article](2019).
Stable orientation tuning in the freely moving rat: Movement-robust orientation-selective neurons in the deep layers of the primary visual cortex.
Røe, Malin Benum; Aasebø, Ida Elisabeth Jørgensen; Mobarhan, Milad; Lensjø, Kristian Kinden; Einevoll, Gaute & Hafting, Torkel
[Show all 7 contributors for this article](2019).
Stable orientation tuning in the freely moving rat: Movement-robust orientation-selective neurons in the deep layers of the primary visual cortex.