Paul Boddie

Image of Paul Boddie
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Mobile phone +47 95233252
Username
Visiting address Gaustadalléen 21 Forskningsparken 0349 Oslo
Postal address Postboks 1137 Blindern 0318 Oslo

Academic interests

  • Bioinformatics
  • Software development

Background

Paul Boddie is a software developer with a Bachelor (Honours) degree in Computer Science from Heriot-Watt University, Edinburgh, Scotland. He has worked in a range of organisations and previously spent several years at the Biotechnology Centre at the University of Oslo, having positions in the Donaldson (bioinformatics) and Thiede (proteomics) groups, where he worked on biomedical literature text mining and more generally on database, application and tool development.

 

Publications

  • Puig, Rafael Riudavets; Boddie, Paul; Khan, Aziz; Castro-Mondragon, Jaime Abraham & Mathelier, Anthony (2021). UniBind: maps of high-confidence direct TF-DNA interactions across nine species. BMC Genomics. ISSN 1471-2164. 22(1), p. 1–17. doi: 10.1186/s12864-021-07760-6.
  • Khan, Aziz; Riudavets Puig, Rafael; Boddie, Paul & Mathelier, Anthony (2020). BiasAway: command-line and web server to generate nucleotide composition-matched DNA background sequences. Bioinformatics. ISSN 1367-4803. doi: 10.1093/bioinformatics/btaa928. Full text in Research Archive
  • Arntzen, Magnus Øverlie; Boddie, Paul; Frick, Rahel; Koehler, Christian & Thiede, Bernd (2015). Consolidation of proteomics data in the Cancer proteomics database. Proteomics. ISSN 1615-9853. 15(22), p. 3765–3771. doi: 10.1002/pmic.201500144.
  • Razick, Sabry; Mora Ortiz, Antonio Carlos; Michalickova, Katerina; Boddie, Paul & Donaldson, Ian Matthew (2011). iRefScape. A Cytoscape plug-in for visualization and data mining of protein interaction data from iRefIndex. BMC Bioinformatics. ISSN 1471-2105. 12(1). doi: 10.1186/1471-2105-12-388.

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Published Mar. 2, 2020 12:48 PM - Last modified Mar. 2, 2020 12:48 PM

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