idalind

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Publications
- Mikocziova, Ivana; Gidoni, Moriah; Lindeman, Ida; Peres, Ayelet; Snir, Omri; Yaari, Gur & Sollid, Ludvig Magne (2020). Polymorphisms in human immunoglobulin heavy chain variable genes and their upstream regions. Nucleic Acids Research. ISSN 0305-1048. 48(10), s 5499- 5510 . doi: https://doi.org/10.1093/nar/gkaa310
- Gidoni, Moriah; Snir, Omri; Peres, Ayelet; Polak, Pazit; Lindeman, Ida; Mikocziova, Ivana; Sarna, Vikas Kumar; Lundin, Knut Erik Aslaksen; Clouser, Christopher; Vigneault, Francois; Collins, Andrew M.; Sollid, Ludvig Magne & Yaari, Gur (2019). Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping. Nature Communications. ISSN 2041-1723. 10:628, s 1- 14 . doi: 10.1038/s41467-019-08489-3 Full text in Research Archive.
- Lindeman, Ida & Stubbington, Michael J.T. (2019). Antigen Receptor Sequence Reconstruction and Clonality Inference from scRNA-Seq Data, In Guo-Cheng Yuan (ed.), Computational Methods for Single-Cell Data Analysis. Humana Press. ISBN 978-1-4939-9056-6. Chapter 15. s 223 - 249 Full text in Research Archive.
- Miragaia, Ricardo J.; Gomes, Tomás; Chomka, Agnieszka; Jardine, Laura; Riedel, Angela; Hegazy, Ahmed N.; Whibley, Natasha; Tucci, Andrea; Chen, Xi; Lindeman, Ida; Emerton, Guy; Krausgruber, Thomas; Shields, Jacqueline; Haniffa, Muzlifah; Powrie, Fiona & Teichmann, Sarah A. (2019). Single-cell transcriptomics of regulatory T cells reveals trajectories of tissue adaptation. Immunity. ISSN 1074-7613. 50(2), s 493- 504.e7 . doi: 10.1016/j.immuni.2019.01.001 Full text in Research Archive.
- Yao, Ying; Zia, Asima; Wyrozemski, Lukasz Adam; Lindeman, Ida; Sandve, Geir Kjetil & Qiao, Shuo Wang (2018). Exploiting antigen receptor information to quantify index switching in single-cell transcriptome sequencing experiments. PLOS ONE. ISSN 1932-6203. 13(12), s 1- 17 . doi: 10.1371/journal.pone.0208484 Full text in Research Archive.
- Schjerven, Hilde; Ayongaba, Etapon Fonabei; Aghajanirefah, Ali; McLaughlin, Jami; Cheng, Donghui; Geng, Huimin; Boyd, Joseph R; Eggesbø, Linn Margrethe; Lindeman, Ida; Heath, Jessica L; Park, Eugene; Witte, Owen N.; Smale, Stephen T.; Frietze, Seth & Müschen, Markus (2017). Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre–B ALL. Journal of Experimental Medicine (JEM). ISSN 0022-1007. 214(3), s 793- 814 . doi: 10.1084/jem.20160049 Full text in Research Archive.
- Lindeman, Ida; Emerton, Guy; Mamanova, Lira; Snir, Omri; Polanski, Krzysztof; Qiao, Shuo Wang; Sollid, Ludvig Magne; Teichmann, Sarah A & Stubbington, Michael J. T. (2018). BraCeR: B-cell-receptor reconstruction and clonality inference from single-cell RNA-seq. Nature Methods. ISSN 1548-7091. 15(8), s 563- 565 . doi: 10.1038/s41592-018-0082-3 Full text in Research Archive.
Published Oct. 6, 2017 3:12 PM
- Last modified Oct. 6, 2017 3:12 PM