Tuula Anneli Nyman

Bilde av Tuula Anneli Nyman
English version of this page
Brukernavn
Besøksadresse Sognsvannsveien 20 Rikshospitalet 0372 Oslo
Postadresse Postboks 4950 Nydalen OUS HF Rikshospitalet 0424 Oslo

Primære forskningsfelt 

  • Proteomikk

  • Biologisk massespektrometri

  • Bioinformatikk

  • Medfødt immunitet

  • Cellesignalisering

Emneord: proteomikk, massespektrometri, medfødt immunitet, cellesignalisering

Publikasjoner

  • Cypryk W, Nyman TA, Matikainen S. From Inflammasome to Exosome-Does Extracellular Vesicle Secretion Constitute an Inflammasome-Dependent Immune Response? Front Immunol. 2018 Sep 25;9:2188.
  • Nyman TA, Lorey MB, Cypryk W, Matikainen S. Mass spectrometry-based proteomic exploration of the human immune system: focus on the inflammasome, global protein secretion, and T cells. Expert Rev Proteomics. 2017 May;14(5):395-407
  • Lorey MB, Rossi K, Eklund KK, Nyman TA*, Matikainen S*. Global characterization of protein secretion from human macrophages following non-canonical caspase-4/5 inflammasome activation. Mol Cell Proteomics. 2017 Feb 14. [Epub ahead of print]
  • Cypryk W, Lorey M, Puustinen A, Nyman TA, Matikainen S. Proteomic and Bioinformatic Characterization of Extracellular Vesicles Released from Human Macrophages upon Influenza A Virus Infection. J Proteome Res. 2017;16:217-227
  • Söderholm S, Fu Y, Gaelings L, Belanov S, Yetukuri L, Berlinkov M, Cheltsov AV, Anders S, Aittokallio T, Nyman TA, Matikainen S, Kainov DE. Multi-Omics Studies towards Novel Modulators of Influenza A Virus-Host Interaction.Viruses. 2016 Sep 29;8(10). pii: E269. Review.
  • Välimäki E, Cypryk W, Virkanen J, Nurmi K, Turunen PM, Eklund KK, Åkerman KE, Nyman TA, Matikainen S. Calpain Activity Is Essential for ATP-Driven Unconventional Vesicle-Mediated Protein Secretion and Inflammasome Activation in Human Macrophages. J Immunol. 2016;197:3315-3325
  • Söderholm S, Kainov DE, Öhman T, Denisova OV, Schepens B, Kulesskiy E, Imanishi SY, Corthals G, Hintsanen P, Aittokallio T, Saelens X, Matikainen S*, Nyman TA*. Phosphoproteomics to characterize host response during influenza A virus infection of human macrophages. Mol Cell Proteomics. 2016;15:3203-3219
  • Christensen MH, Jensen SB, Miettinen JJ, Luecke S, Prabakaran T, Reinert LS, Mettenleiter T, Chen ZJ, Knipe DM, Sandri-Goldin RM, Enquist LW, Hartmann R, Mogensen TH, Rice SA, Nyman TA, Matikainen S, Paludan SR. HSV-1 ICP27 targets the TBK1-activated STING signalsome to inhibit virus-induced type I IFN expression. EMBO J. 2016;35:1385-99.
  • Öhman T, Söderholm S, Paidikondala M, Lietzén N, Matikainen S, Nyman TA. Phosphoproteome characterization reveals that Sendai-virus infection activates mTOR signaling in human epithelial cells. Proteomics. 2015;15:2087-97.
  • Öhman T, Söderholm S, Hintsanen P, Välimäki E, Lietzén N, MacKintosh C, Aittokallio T, Matikainen S, Nyman TA. Phosphoproteomics Combined with Quantitative 14-3-3-affinity Capture Identifies SIRT1 and RAI as Novel Regulators of Cytosolic dsRNA Recognition Pathway. Mol Cell Proteomics. 2014;13,2604-17.
  • Cypryk W, Öhman T, Eskelinen E-L, Matikainen S, Nyman TA. Quantitative proteomics of extracellular vesicles released from human monocyte-derived macrophages upon β-glucan stimulation. J Proteome Res. 2014;13:2468-77.
  • Öhman T, Teirilä L, Lahesmaa AM, Kankkunen P, Veckman V, Saijo S, Wolff H, Hautaniemi S, Nyman TA*, Matikainen S*. Dectin-1 pathway activates robust autophagy-dependent unconventional protein secretion in human macrophages, J Immunol. 2014;192:5952-62.
  • Välimäki E, Miettinen J, Lietzén N, Matikainen S*, Nyman TA*. Monosodium urate activates Src/Pyk2/PI3 kinase and cathepsin dependent unconventional protein secretion from human primary macrophages. Mol Cell Proteomics. 2013;12:749-63.
  • Miettinen JJ, Matikainen S, Nyman TA. Global secretome characterisation of Herpes simplex virus 1 infected human primary macrophages, J Virol. 2012;86:12770-8.
  • Lietzén N, Öhman T*, Rintahaka J*, Julkunen I, Aittokallio T, Matikainen S*, Nyman TA*. Quantitative subcellular proteome and secretome profiling of Influenza A virus-infected human primary macrophages. PLoS Pathogens 2011 May;7(5):e1001340.

*equal contribution

  • Krapf, Solveig; Lund, Jenny; Bakke, Hege Gilbø; Nyman, Tuula Anneli; Bartesaghi, Stefano & Peng, Xiao-Rong [Vis alle 9 forfattere av denne artikkelen] (2023). SENP2 knockdown in human adipocytes reduces glucose metabolism and lipid accumulation, while increases lipid oxidation . Metabolism Open. ISSN 2589-9368. 18. doi: 10.1016/j.metop.2023.100234. Fulltekst i vitenarkiv
  • Lunde, Ngoc Nguyen; Osoble, Nimo Mukhtar Mohamud; Dalmao-Fernandez, Andrea; Lukacs, Alfreda Serwah; Jafari, Abbas & Singh, Sachin [Vis alle 10 forfattere av denne artikkelen] (2023). Interplay between Cultured Human Osteoblastic and Skeletal Muscle Cells: Effects of Conditioned Media on Glucose and Fatty Acid Metabolism. Biomedicines. 11:2908(11), s. 1–20. doi: 10.3390/biomedicines11112908. Fulltekst i vitenarkiv
  • Saidu, Nathaniel Edward Bennett; Larsen, Miriam Aarsund; Sørensen, Eva; Stensland, Maria; Nyman, Tuula Anneli & ULVMOEN, AINA [Vis alle 8 forfattere av denne artikkelen] (2023). Identifying a core protein signature of small extracellular vesicles derived from B-cell precursor acute lymphoblastic leukaemia. Scandinavian Journal of Immunology. ISSN 0300-9475. 99(3), s. 1–10. doi: 10.1111/sji.13341. Fulltekst i vitenarkiv
  • Misceo, Doriana; Lirussi, Lisa; Strømme, Petter; Sumathipala, Dulika Sanjeewani; Guerin, Andrea & Wolf, Nicole I [Vis alle 14 forfattere av denne artikkelen] (2023). A homozygous POLR1A variant causes leukodystrophy and affects protein homeostasis. Brain. ISSN 0006-8950. 146(8), s. 3513–3527. doi: 10.1093/brain/awad086. Fulltekst i vitenarkiv
  • Harrison, Sean Philip; Siller, Richard; Tanaka, Yoshiaki; Chollet Dugarte, Maria Eugenia; de la Morena-Barrio, María Eugenia & Xiang, Yangfei [Vis alle 36 forfattere av denne artikkelen] (2023). Scalable production of tissue-like vascularized liver organoids from human PSCs. Experimental and Molecular Medicine. ISSN 1226-3613. 55, s. 2005–2024. doi: 10.1038/s12276-023-01074-1. Fulltekst i vitenarkiv
  • Hammarén, Milka Marjut; Luukinen, Hanna; Sillanpää, Alina; Remans, Kim; Lapouge, Karine & Custódio, Tânia [Vis alle 14 forfattere av denne artikkelen] (2023). In vitro and ex vivo proteomics of Mycobacterium marinum biofilms and the development of biofilm-binding synthetic nanobodies. mSystems. ISSN 2379-5077. 8:e01073-22(3), s. 1–27. doi: 10.1128/msystems.01073-22. Fulltekst i vitenarkiv
  • Kangas, Petra; Nyman, Tuula Anneli; Metsähonkala, Liisa; Burns, Cameron; Tempest, Robert & Williams, Tim [Vis alle 8 forfattere av denne artikkelen] (2023). Towards optimised extracellular vesicle proteomics from cerebrospinal fluid. Scientific Reports. ISSN 2045-2322. 13:9564, s. 1–13. doi: 10.1038/s41598-023-36706-z. Fulltekst i vitenarkiv
  • Frerker, Nadine; Karlsen, Tommy Aleksander; Stensland, Maria; Nyman, Tuula Anneli; Rayner, Simon & Brinchmann, Jan Engelsen (2023). Comparison between articular chondrocytes and mesenchymal stromal cells for the production of articular cartilage implants. Frontiers in Bioengineering and Biotechnology. ISSN 2296-4185. 11. doi: 10.3389/fbioe.2023.1116513. Fulltekst i vitenarkiv
  • Gorski, Katarin; Jackson, Christopher B.; Nyman, Tuula Anneli; Rezov, Veronika; Battersby, Brendan J. & Lehesjoki, Anna-Elina (2023). Progressive mitochondrial dysfunction in cerebellar synaptosomes of cystatin B-deficient mice. Frontiers in Molecular Neuroscience. ISSN 1662-5099. 16:1175851, s. 1–12. doi: 10.3389/fnmol.2023.1175851. Fulltekst i vitenarkiv
  • Aas, Vigdis; Øvstebø, Reidun; Brusletto, Berit; Aspelin, Trude; Trøseid, Anne-Marie Siebke & Qureshi, Saba [Vis alle 10 forfattere av denne artikkelen] (2023). Distinct microRNA and protein profiles of extracellular vesicles secreted from myotubes from morbidly obese donors with type 2 diabetes in response to electrical pulse stimulation. Frontiers in Physiology. ISSN 1664-042X. 14. doi: 10.3389/fphys.2023.1143966. Fulltekst i vitenarkiv
  • Cypryk, Wojciech; Czernek, Liliana; Horodecka, Katarzyna; Chrzanowski, Jędrzej; Stanczak, Marcin & Nurmi, Katariina [Vis alle 14 forfattere av denne artikkelen] (2023). Lipopolysaccharide Primes Human Macrophages for Noncanonical Inflammasome-Induced Extracellular Vesicle Secretion. Journal of Immunology. ISSN 0022-1767. 210(3), s. 322–334. doi: 10.4049/jimmunol.2200444.
  • Hautala, Katja; Pursiainen, Jami; Näreaho, Anu; Nyman, Tuula Anneli; Varmanen, Pekka & Sukura, Antti [Vis alle 8 forfattere av denne artikkelen] (2022). Label-free quantitative proteomics and immunoblotting identifies immunoreactive and other excretory-secretory (E/S) proteins of Anoplocephala perfoliata. Frontiers in Immunology. ISSN 1664-3224. 13:1045468, s. 1–14. doi: 10.3389/fimmu.2022.1045468. Fulltekst i vitenarkiv
  • Larsen, Miriam Aarsund; Nyman, Tuula Anneli; Stensland, Maria Ekman; Wu, Yunjie & Inngjerdingen, Marit (2022). Isolation of a cytolytic subpopulation of extracellular vesicles derived from NK cells containing NKG7 and cytolytic proteins. Frontiers in Immunology. ISSN 1664-3224. 13:977353, s. 1–12. doi: 10.3389/fimmu.2022.977353. Fulltekst i vitenarkiv
  • Høyer, Helle; Busk, Øyvind Løvold; Esbensen, Qin Ying; Røsby, Oddveig; Hilmarsen, Hilde Tveitan & Russell, Michael Bjørn [Vis alle 9 forfattere av denne artikkelen] (2022). Clinical characteristics and proteome modifications in two Charcot-Marie-Tooth families with the AARS1 Arg326Trp mutation. BMC Neurology. ISSN 1471-2377. 22(1). doi: 10.1186/s12883-022-02828-6. Fulltekst i vitenarkiv
  • Salvati, Annamaria; Melone, Viola; Sellitto, Assunta; Rizzo, Francesca; Tarallo, Roberta & Nyman, Tuula Anneli [Vis alle 9 forfattere av denne artikkelen] (2022). Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer. Breast Cancer Research. ISSN 1465-5411. 24:52(1), s. 1–23. doi: 10.1186/s13058-022-01547-7. Fulltekst i vitenarkiv
  • Mengeste, Abel Mulu; Nikolic, Natasa; Dalmao Fernandez, Andrea; Feng, Yuan Zeng; Nyman, Tuula Anneli & Kersten, Sander [Vis alle 11 forfattere av denne artikkelen] (2022). Insight Into the Metabolic Adaptations of Electrically Pulse-Stimulated Human Myotubes Using Global Analysis of the Transcriptome and Proteome. Frontiers in Physiology. ISSN 1664-042X. 13. doi: 10.3389/fphys.2022.928195.
  • San-Martin-Galindo, Paola; Rosqvist, Emil; Tolvanen, Stiina; Miettinen, Ilkka; Savijoki, Kirsi & Nyman, Tuula Anneli [Vis alle 8 forfattere av denne artikkelen] (2021). Modulation of virulence factors of Staphylococcus aureus by nanostructured surfaces. Materials & design. ISSN 0264-1275. 208:109879, s. 1–19. doi: 10.1016/j.matdes.2021.109879. Fulltekst i vitenarkiv
  • Savijoki, Kirsi; Myllymäki, Henna; Luukinen, Hanna; Paulamäki, Lauri; Vanha-aho, Leena-Maija & Svorjova, Aleksandra [Vis alle 12 forfattere av denne artikkelen] (2021). Surface-Shaving Proteomics of Mycobacterium marinum Identifies Biofilm Subtype-Specific Changes Affecting Virulence, Tolerance, and Persistence. mSystems. ISSN 2379-5077. 6:e00500(3), s. 1–23. doi: 10.1128/mSystems.00500-21. Fulltekst i vitenarkiv
  • Reigada, Ines; San-Martin-Gadolino, Paola; Gilbert-Girard, Shella; Chiaro, Jacopo; Cerullo, Vincenzo & Savijoki, Kirsi [Vis alle 9 forfattere av denne artikkelen] (2021). Surfaceome and Exoproteome Dynamics in Dual-Species Pseudomonas aeruginosa and Staphylococcus aureus Biofilms. Frontiers in Microbiology. ISSN 1664-302X. 12:672975, s. 1–23. doi: 10.3389/fmicb.2021.672975. Fulltekst i vitenarkiv
  • Kaivola, Juha; Nyman, Tuula Anneli & Matikainen, Sampsa (2021). Inflammasomes and sars-cov-2 infection. Viruses. ISSN 1999-4915. 13:2513(12), s. 1–11. doi: 10.3390/v13122513. Fulltekst i vitenarkiv
  • Skagen, Christine; Nyman, Tuula Anneli; Xiao-Rong, Peng; O'Mahony, Sven; Kase, Eili Tranheim & Rustan, Arild Christian [Vis alle 7 forfattere av denne artikkelen] (2021). Chronic treatment with terbutaline increases glucose and oleic acid oxidation and protein synthesis in cultured human myotubes. Current Research in Pharmacology and Drug Discovery (CRPHAR). ISSN 2590-2571. 2, s. 1–11. doi: 10.1016/j.crphar.2021.100039.
  • Wanichawan, Pimthanya; Skogestad, Jonas; Lunde, Marianne; Støle, Thea Parsberg; Stensland, Maria & Nyman, Tuula Anneli [Vis alle 10 forfattere av denne artikkelen] (2021). Design of a proteolytically stable sodium-calcium exchanger 1 activator peptide for in vivo studies. Frontiers in Pharmacology. ISSN 1663-9812. 12(638646). doi: 10.3389/fphar.2021.638646. Fulltekst i vitenarkiv
  • Vestad, Beate; Nyman, Tuula A.; Hove-Skovsgaard, Malene; Stensland, Maria; Hoel, Hedda Benedicte & Siebke, Anne-Marie [Vis alle 13 forfattere av denne artikkelen] (2021). Plasma extracellular vesicles in people living with HIV and type 2 diabetes are related to microbial translocation and cardiovascular risk. Scientific Reports. ISSN 2045-2322. 11(1). doi: 10.1038/s41598-021-01334-y. Fulltekst i vitenarkiv
  • Holm, Sverre; Kared, Hassen; Michelsen, Annika Elisabet; Kong, Xiang Yi; Dahl, Tuva Børresdatter & Schultz, Nina Haagenrud [Vis alle 21 forfattere av denne artikkelen] (2021). Immune complexes, innate immunity, and NETosis in ChAdOx1 vaccine-induced thrombocytopenia. European Heart Journal. ISSN 0195-668X. 42(39), s. 4064–4072. doi: 10.1093/eurheartj/ehab506. Fulltekst i vitenarkiv
  • Quiles-Jiménez, Ana M T; Gregersen, Ida; Segers, Filip; Skarpengland, Tonje; Kroustallaki, Pinelopi & Yang, Kuan [Vis alle 30 forfattere av denne artikkelen] (2021). DNA glycosylase Neil3 regulates vascular smooth muscle cell biology during atherosclerosis development. Atherosclerosis. ISSN 0021-9150. 324, s. 123–132. doi: 10.1016/j.atherosclerosis.2021.02.023. Fulltekst i vitenarkiv
  • Røberg-Larsen, Hanne; Lundanes, Elsa; Nyman, Tuula Anneli; Berven, Frode Steingrimsen & Wilson, Steven Ray Haakon (2021). Liquid chromatography, a key tool for the advancement of single-cell omics analysis. Analytica Chimica Acta. ISSN 0003-2670. 1178:338551, s. 1–9. doi: 10.1016/j.aca.2021.338551.
  • Mirlashari, Mohammad Reza; Vetlesen, Annette; Nissen-Meyer, Lise Sofie Haug; Stensland, Maria Ekman; Singh, Sachin Kumar & Nyman, Tuula Anneli [Vis alle 7 forfattere av denne artikkelen] (2021). Proteomic study of apheresis platelets made HLA class I deficient for transfusion of refractory patients. PROTEOMICS - Clinical Applications. ISSN 1862-8346. 15:e2100022(6), s. 1–8. doi: 10.1002/prca.202100022. Fulltekst i vitenarkiv
  • Snapkov, Igor; Chernigovskaia, Maria; Sinitcyn, Pavel; Le, Quy Khang; Nyman, Tuula Anneli & Greiff, Victor (2021). Progress and challenges in mass spectrometry-based analysis of antibody repertoires. Trends in Biotechnology. ISSN 0167-7799. 00, s. 1–19. doi: 10.1016/j.tibtech.2021.08.006. Fulltekst i vitenarkiv
  • Borowicz, Pawel; Gjerstad, Vibeke Sundvold; Chan, Hanna; Abrahamsen, Greger; Kjelstrup, Hanna & Nyman, Tuula Anneli [Vis alle 7 forfattere av denne artikkelen] (2021). Tyr192 Regulates Lymphocyte-Specific Tyrosine Kinase Activity in T Cells. Journal of Immunology. ISSN 0022-1767. 207(4), s. 1128–1137. doi: 10.4049/jimmunol.2001105.
  • Stamnæs, Jorunn; Stray, Daniel; Stensland, Maria; Sarna, Vikas Kumar; Nyman, Tuula Anneli & Lundin, Knut Erik Aslaksen [Vis alle 7 forfattere av denne artikkelen] (2021). In well‐treated celiac patients low‐level mucosal inflammation predicts response to 14‐day gluten challenge. Advanced Science. ISSN 2198-3844. 8:2003526(4), s. 1–7. doi: 10.1002/advs.202003526. Fulltekst i vitenarkiv
  • Nyman, Tuula Anneli; Gigantino, Valerio; Salvati, Annamaria; Giurato, G; Palumbo, D & Strianese, O [Vis alle 10 forfattere av denne artikkelen] (2020). Identification of Antiestrogen-Bound Estrogen Receptor α Interactomes in Hormone-Responsive Human Breast Cancer Cell Nuclei. Proteomics. ISSN 1615-9853. 20(19-20). doi: 10.1002/pmic.202000135.
  • Harrison, Sean; Siller, Richard; Tanaka, Yoshiaki; Xiang, Yangfei; Patterson, Benjamin & Kempf, Henning [Vis alle 29 forfattere av denne artikkelen] (2020). Scalable production of tissue-like vascularised liver organoids from human PSCs. bioRxiv. ISSN 2692-8205. doi: 10.1101/2020.12.02.406835.
  • Gorski, Katarin; Spoljaric, Albert; Nyman, Tuula Anneli; Kaila, Kai; Battersby, Brendan J. & Lehesjoki, Anna-Elina (2020). Quantitative Changes in the Mitochondrial Proteome of Cerebellar Synaptosomes From Preclinical Cystatin B-Deficient Mice. Frontiers in Molecular Neuroscience. ISSN 1662-5099. 13:570640, s. 1–13. doi: 10.3389/fnmol.2020.570640. Fulltekst i vitenarkiv
  • Matikainen, Sampsa; Nyman, Tuula Anneli & Cypryk, Wojciech (2020). Function and regulation of noncanonical caspase-4/5/11 inflammasome. Journal of Immunology. ISSN 0022-1767. 204(12), s. 3063–3069. doi: 10.4049/jimmunol.2000373.
  • Louwe, Maria Cornelia; Olsen, Maria Belland; Kaasbøll, Ole Jørgen; Yang, Kuan; Fosshaug, Linn Elisabeth Lillerud & Alfsnes, Katrine [Vis alle 25 forfattere av denne artikkelen] (2020). Absence of NLRP3 Inflammasome in Hematopoietic Cells Reduces Adverse Remodeling After Experimental Myocardial Infarction. JACC: Basic to Translational Science. ISSN 2452-302X. 5(12), s. 1210–1224. doi: 10.1016/j.jacbts.2020.09.013. Fulltekst i vitenarkiv
  • Mathiesen, Sabrina Bech; Lunde, Marianne; Stensland, Maria; Martinsen, Marita; Nyman, Tuula Anneli & Christensen, Geir Arve [Vis alle 7 forfattere av denne artikkelen] (2020). The cardiac syndecan-2 interactome. Frontiers in Cell and Developmental Biology. ISSN 2296-634X. 8:792, s. 1–18. doi: 10.3389/fcell.2020.00792. Fulltekst i vitenarkiv
  • Szibor, Marten; Schreckenberg, Rolf; Gizatullina, Zemfira; Dufour, Eric; Wiesnet, Marion & Dhandapani, Praveen K. [Vis alle 20 forfattere av denne artikkelen] (2020). Respiratory chain signalling is essential for adaptive remodelling following cardiac ischaemia. Journal of Cellular and Molecular Medicine. ISSN 1582-1838. 24(6), s. 3534–3548. doi: 10.1111/jcmm.15043. Fulltekst i vitenarkiv
  • Eieland, Alexander K.; Normann, Kjersti R.; Sundaram, Arvind Y. M.; Nyman, Tuula A.; Øystese, Kristin A. B. & Lekva, Tove [Vis alle 9 forfattere av denne artikkelen] (2020). Distinct pattern of endoplasmic reticulum protein processing and extracellular matrix proteins in functioning and silent corticotroph pituitary adenomas. Cancers. ISSN 2072-6694. 12(10), s. 1–20. doi: 10.3390/cancers12102980. Fulltekst i vitenarkiv
  • Matikainen, Sampsa; Nyman, Tuula A. & Cypryk, Wojciech (2020). Inflammasomes: Exosomal miRNAs loaded for action. Journal of Cell Biology. ISSN 0021-9525. 219:e202008130(10), s. 1–2. doi: 10.1083/jcb.202008130. Fulltekst i vitenarkiv
  • Krapf, Solveig Astrid; Lund, Jenny; Lundkvist, Malin; Grebstad Dale, Marianne; Nyman, Tuula Anneli & Thoresen, G. Hege [Vis alle 7 forfattere av denne artikkelen] (2020). Pancreatic cancer cells show lower oleic acid oxidation and their conditioned medium inhibits oleic acid oxidation in human myotubes. Pancreatology (Print). ISSN 1424-3903. 20(4), s. 676–682. doi: 10.1016/j.pan.2020.04.014.
  • Savijoki, Kirsi; Miettinen, Ilkka; Nyman, Tuula Anneli; Kortesoja, Maarit; Hanski, Leena & Varmanen, Pekka [Vis alle 7 forfattere av denne artikkelen] (2020). Growth Mode and Physiological State of Cells Prior to Biofilm Formation Affect Immune Evasion and Persistence of Staphylococcus aureus. Microorganisms. ISSN 2076-2607. 8:106(1), s. 1–24. doi: 10.3390/microorganisms8010106. Fulltekst i vitenarkiv
  • Hiltunen, Anna K.; Savijoki, Kirsi; Nyman, Tuula Anneli; Miettinen, Ilkka; Ihalainen, Petri & Peltonen, Jouko [Vis alle 7 forfattere av denne artikkelen] (2019). Structural and functional dynamics of staphylococcus aureus biofilms and biofilm matrix proteins on different clinical materials. Microorganisms. ISSN 2076-2607. 7(12). doi: 10.3390/microorganisms7120584. Fulltekst i vitenarkiv
  • Alexandrova, Elena; Giurato, Giorgio; Saggese, Pasquale; Pecoraro, Giovanni; Lamberti, Jessica & Ravo, Maria [Vis alle 16 forfattere av denne artikkelen] (2019). Interaction proteomics identifies estrogen receptor beta association with multiple chromatin repressive complexes to inhibit cholesterol biosynthesis and exert an oncosuppressive role in triple-negative breast cancer. Molecular & Cellular Proteomics. ISSN 1535-9476. doi: 10.1074/mcp.RA119.001817. Fulltekst i vitenarkiv
  • Lunde, Ngoc Dieu Nguyen; Gregersen, Ida; Ueland, Thor; Shetelig, Christian; Holm, Sverre & Kong, Xiang Yi [Vis alle 31 forfattere av denne artikkelen] (2019). Legumain is upregulated in acute cardiovascular events and associated with improved outcome – potentially related to anti-inflammatory effects on macrophages. Atherosclerosis. ISSN 0021-9150. s. 1–9. doi: 10.1016/j.atherosclerosis.2019.12.008. Fulltekst i vitenarkiv
  • Yang, Kuan; Lauritzen, Knut Husø; Olsen, Maria Belland; Dahl, Tuva Børresdatter; Ranheim, Trine & Ahmed, Muhammad Shakil [Vis alle 12 forfattere av denne artikkelen] (2019). Low cellular NAD+ compromises lipopolysaccharide-induced inflammatory responses via inhibiting TLR4 signal transduction in human monocytes. Journal of Immunology. ISSN 0022-1767. 203(6), s. 1598–1608. doi: 10.4049/jimmunol.1801382.
  • Nassa, Giovanni; Giurato, Giorgio; Salvati, Annamaria; Gigantino, Valerio; Pecoraro, Giovanni & Lamberti, Jessica [Vis alle 10 forfattere av denne artikkelen] (2019). The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei. Scientific Data. ISSN 2052-4463. 6(1). doi: 10.1038/s41597-019-0179-2. Fulltekst i vitenarkiv
  • Savijoki, Kirsi; Nyman, Tuula Anneli; Kainulainen, Veera; Miettinen, Ilkka; Siljamaki, Pia & Fallarero, Adyary [Vis alle 9 forfattere av denne artikkelen] (2019). Growth mode and carbon source impact the surfaceome dynamics of lactobacillus rhamnosus GG. Frontiers in Microbiology. ISSN 1664-302X. 10. doi: 10.3389/fmicb.2019.01272. Fulltekst i vitenarkiv
  • Nassa, Giovanni; Salvati, Annamaria; Tarallo, Roberta; Gigantino, Valerio; Alexandrova, Elena & Memoli, Domenico [Vis alle 18 forfattere av denne artikkelen] (2019). Inhibition of histone methyltransferase DOT1L silences ER gene and blocks proliferation of antiestrogen-resistant breast cancer cells. Indian Journal of Pure & Applied Physics. ISSN 0019-5596. 5(2), s. 1–14. doi: 10.1126/sciadv.aav5590. Fulltekst i vitenarkiv
  • Mathiesen, Sabrina Bech; Lunde, Marianne; Aronsen, Jan Magnus; Romaine, Andreas; Kaupang, Anita & Martinsen, Marita [Vis alle 11 forfattere av denne artikkelen] (2019). The cardiac syndecan-4 interactome reveals a role for syndecan-4 in nuclear translocation of muscle LIM protein (MLP). Journal of Biological Chemistry. ISSN 0021-9258. 294(22), s. 8717–8731. doi: 10.1074/jbc.RA118.006423. Fulltekst i vitenarkiv
  • Richter, Uwe; Ng, Kah Ying; Suomi, Fumi; Marttinen, Paula; Turunen, Taina & Jackson, Christopher [Vis alle 18 forfattere av denne artikkelen] (2019). Mitochondrial stress response triggered by defects in protein synthesis quality control. Life Science Alliance (LSA). ISSN 2575-1077. 2:e201800219(1), s. 1–17. doi: 10.26508/lsa.201800219. Fulltekst i vitenarkiv
  • Sikorski, Krzysztof; Mehta, Adi; Inngjerdingen, Marit; Thakor, Flourina Kumar; Kling, Simon & Kalina, Tomas [Vis alle 14 forfattere av denne artikkelen] (2018). A high-throughput pipeline for validation of antibodies. Nature Methods. ISSN 1548-7091. 15(11), s. 909–912. doi: 10.1038/s41592-018-0179-8. Fulltekst i vitenarkiv
  • Cypryk, Wojciech; Nyman, Tuula Anneli & Matikainen, Sampsa (2018). From inflammasome to exosome-does extracellular vesicle secretion constitute an inflammasome-dependent immune response? Frontiers in Immunology. ISSN 1664-3224. 9:2188, s. 1–8. doi: 10.3389/fimmu.2018.02188.
  • Giurato, Giorgio; Nassa, Giovanni; Salvati, Annamaria; Alexandrova, Elena; Rizzo, Francesca & Nyman, Tuula Anneli [Vis alle 8 forfattere av denne artikkelen] (2018). Quantitative mapping of RNA-mediated nuclear estrogen receptor β interactome in human breast cancer cells. Scientific Data. ISSN 2052-4463. 5:180031, s. 1–9. doi: 10.1038/sdata.2018.31.
  • Nassa, Giovanni; Giurato, Giorgio; Cimmino, Giovanni; Rizzo, Francesca; Ravo, Maria & Salvati, Annamaria [Vis alle 13 forfattere av denne artikkelen] (2018). Splicing of platelet resident pre-mRNAs upon activation by physiological stimuli results in functionally relevant proteome modifications. Scientific Reports. ISSN 2045-2322. 8:498, s. 1–12. doi: 10.1038/s41598-017-18985-5.
  • Frohnmeyer, Esther; Deptula, Paulina; Nyman, Tuula Anneli; Laine, Pia K.S.; Vihinen, Helena & Paulin, Lars [Vis alle 11 forfattere av denne artikkelen] (2018). Secretome profiling of Propionibacterium freudenreichii reveals highly variable responses even among the closely related strains. Microbial Biotechnology. ISSN 1751-7907. 11(3), s. 510–526. doi: 10.1111/1751-7915.13254. Fulltekst i vitenarkiv
  • Aittomäki, Saara; Valanne, Susanna; Lehtinen, Tapio; Matikainen, Sampsa; Nyman, Tuula Anneli & Rämet, Mika [Vis alle 7 forfattere av denne artikkelen] (2017). Proprotein convertase Furin1 expression in the Drosophila fat body is essential for a normal antimicrobial peptide response and bacterial host defense. The FASEB Journal. ISSN 0892-6638. 31(11), s. 4770–4782. doi: 10.1096/fj.201700296R.
  • Nyman, Tuula Anneli; Cypryk, Wojciech; Lorey, Martina B.; Puustinen, Anne & Matikainen, Sampsa (2017). Proteomic and bioinformatic characterization of extracellular vesicles released from human macrophages upon influenza A virus infection. Journal of Proteome Research. ISSN 1535-3893. doi: 10.1021/acs.jproteome.6b00596.
  • Nyman, Tuula Anneli; Nassa, Giovanni; Tarallo, Roberta; Giurato, Giorgio; Bruno, G & Ravo, Maria [Vis alle 18 forfattere av denne artikkelen] (2017). The nuclear receptor ERβ engages AGO2 in regulation of gene transcription, RNA splicing and RISC loading. Genome Biology. ISSN 1465-6906. doi: 10.1186/s13059-017-1321-0. Fulltekst i vitenarkiv
  • Nyman, Tuula Anneli; Matikainen, Sampsa; Cypryk, Wojciech & Lorey, Martina B. (2017). Mass spectrometry-based proteomic exploration of the human immune system -focus on the inflammasome, global protein secretion, and T cells. Expert Review of Proteomics. ISSN 1478-9450. doi: 10.1080/14789450.2017.1319768.
  • Nyman, Tuula Anneli; Matikainen, Sampsa; Lorey, Martina B.; Rossi, M & Eklund, Kari K. (2017). Global characterization of protein secretion from human macrophages following non-canonical caspase-4/5 inflammasome activation. Molecular & Cellular Proteomics. ISSN 1535-9476. doi: 10.1074/mcp.M116.064840. Fulltekst i vitenarkiv
  • Gaelings, Lana; Söderholm, Sandra; Bugai, Andrii; Fu, Yu; Nandania, Jatin & Schepens, Bert [Vis alle 23 forfattere av denne artikkelen] (2017). Regulation of kynurenine biosynthesis during influenza virus infection. The FEBS Journal. ISSN 1742-464X. 284(2), s. 222–236. doi: 10.1111/febs.13966.
  • Nyman, Tuula Anneli & Matikainen, Sampsa (2017). Proteomics to study macrophage response to viral infection. Journal of Proteomics. ISSN 1874-3919. 180, s. 99–107. doi: 10.1016/j.jprot.2017.06.018. Fulltekst i vitenarkiv
  • Deptula, Paulina; Chamlagain, Bhawani; Edelmann, Minnamari; Sangsuwan, Panchanit; Nyman, Tuula Anneli & Savijoki, Kirsi [Vis alle 8 forfattere av denne artikkelen] (2017). Food-like growth conditions support production of active vitamin B12 by Propionibacterium freudenreichii 2067 without DMBI, the lower ligand base, or cobalt supplementation. Frontiers in Microbiology. ISSN 1664-302X. 8. doi: 10.3389/fmicb.2017.00368.
  • Dumont, Vincent; Tolvanen, Tuomas A.; Kuusela, Sara; Wang, Hong; Nyman, Tuula Anneli & Lindfors, Sonja [Vis alle 12 forfattere av denne artikkelen] (2017). PACSIN2 accelerates nephrin trafficking and is up-regulated in diabetic kidney disease. The FASEB Journal. ISSN 0892-6638. 31(9), s. 3978–3990. doi: 10.1096/fj.201601265R.
  • Tarallo, Roberta; Giurato, Giorgio; Bruno, Giuseppina; Ravo, Maria; Rizzo, Francesca & Salvati, Annamaria [Vis alle 18 forfattere av denne artikkelen] (2017). The nuclear receptor ERβ engages AGO2 in regulation of gene transcription, RNA splicing and RISC loading. Genome Biology. ISSN 1465-6906. 18:189, s. 1–27. doi: 10.1186/s13059-017-1321-0.
  • Bulanova, Daria; Ianevski, Aleksandr; Bugai, Andrii; Akimov, Yevhen; Kuivanen, Suvi & Paavilainen, Henrik [Vis alle 43 forfattere av denne artikkelen] (2017). Antiviral properties of chemical inhibitors of cellular anti-apoptotic Bcl-2 proteins. Viruses. ISSN 1999-4915. 9(10). doi: 10.3390/v9100271. Fulltekst i vitenarkiv
  • Lorey, Martina B.; Rossi, Katriina; Eklund, Kari K.; Nyman, Tuula Anneli & Matikainen, Sampsa (2017). Global characterization of protein secretion from human macrophages following non-canonical caspase-4/5 inflammasome activation. Molecular & Cellular Proteomics. ISSN 1535-9476. 16(4), s. S187–S199. doi: 10.1074/mcp.M116.064840.
  • Nyman, Tuula Anneli; Lorey, Martina B.; Cypryk, Wojciech & Matikainen, Sampsa (2017). Mass spectrometry-based proteomic exploration of the human immune system: focus on the inflammasome, global protein secretion, and T cells. Expert Review of Proteomics. ISSN 1478-9450. 14(5), s. 395–407. doi: 10.1080/14789450.2017.1319768.
  • Nyman, Tuula Anneli; Söderholm, Sandra; Kainov, Denis; Ohman, Tiina; Denisova, Oxana V. & Schepens, Bert [Vis alle 13 forfattere av denne artikkelen] (2016). Phosphoproteomics to Characterize Host Response During Influenza A Virus Infection of Human Macrophages. Molecular & Cellular Proteomics. ISSN 1535-9476. doi: 10.1074/mcp.m116.057984. Fulltekst i vitenarkiv
  • Cypryk, Wojciech; Lorey, Martina; Puustinen, Anne; Nyman, Tuula Anneli & Matkainen, Sampsa (2016). Proteomic and Bioinformatic Characterization of Extracellular Vesicles Released from Human Macrophages upon Influenza A Virus Infection. Journal of Proteome Research. ISSN 1535-3893. 16(1), s. 217–227. doi: 10.1021/acs.jproteome.6b00596.
  • Anastasina, Maria; Le May, Nicolas; Bugai, Andrii; Fu, Yu; Söderholm, Sandra & Gaelings, Lana [Vis alle 16 forfattere av denne artikkelen] (2016). Influenza virus NS1 protein binds cellular DNA to block transcription of antiviral genes. Biochimica et Biophysica Acta. Gene Regulatory Mechanisms. ISSN 1874-9399. 1859(11), s. 1440–1448. doi: 10.1016/j.bbagrm.2016.09.005.
  • Söderholm, Sandra; Kainov, Denis E.; Öhman, Tiina; Denisova, Oxana V.; Schepens, Bert & Kulesskiy, Evgeny [Vis alle 13 forfattere av denne artikkelen] (2016). Phosphoproteomics to characterize host response during influenza a virus infection of human macrophages. Molecular & Cellular Proteomics. ISSN 1535-9476. 15(10), s. 3203–3219. doi: 10.1074/mcp.M116.057984.

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  • Le, Quy Khang; Chernigovskaia, Mariia; Greiff, Victor & Nyman, Tuula Anneli (2024). Benchmarking and integrating human B-cell receptor genomic and antibody proteomic profiling. bioRxiv. ISSN 2692-8205. doi: 10.1101/2023.11.01.565093.
  • Ueland, Thor; Äikäs, Lauri A.O.; Dahl, Tuva Børresdatter; Gregersen, Ida; Olsen, Maria Belland & Michelsen, Annika Elisabet [Vis alle 20 forfattere av denne artikkelen] (2023). Low-density lipoprotein particles carrying proinflammatory proteins with altered aggregation pattern detected in COVID-19 patients 3 months after hospitalization. Journal of Infection. ISSN 0163-4453. 86(5), s. 489–492. doi: 10.1016/j.jinf.2023.02.024.
  • Chan, Hanna; Borowicz, Pawel; Kjelstrup, Hanna; Gilmour, Brian Christopher; Loza, Ivan Garcia & Stensland, Maria [Vis alle 8 forfattere av denne artikkelen] (2022). Novel interaction partners of the SH2 domain in T cell specific adaptor protein (TSAd).
  • Foss, Kari Bente; Aas, Vigdis; Hussein, Abdille; Hussain, Misbah; Brusletto, Berit Sletbakk & Olstad, Ole Kristoffer [Vis alle 10 forfattere av denne artikkelen] (2021). Extracellular vesicles from skeletal muscle cells isolated from extremely obese patients with and without type 2-diabetes show different protein- and miRNA-pattern.
  • Bakketeig, Eris Aas; Olsen, Christine; Berg, Henriette Engen; Nyman, Tuula Anneli; Thiede, Bernd & Lundanes, Elsa [Vis alle 8 forfattere av denne artikkelen] (2021). Optimization of concatenation of fractions in comprehensive two dimensional liquid chromatography bottom-up proteomics.
  • Borowicz, Pawel; Sundvold-Gjerstad, Vibeke; Chan, Hanna; Abrahamsen, Greger; Kjelstrup, Hanna & Medina, Daniel [Vis alle 8 forfattere av denne artikkelen] (2019). Tyr192 in the Lck SH2 domain affects the regulation of Lck activity.
  • Borowicz, Pawel; Sundvold-Gjerstad, Vibeke; Abrahamsen, Greger; Kjelstrup, Hanna; Nyman, Tuula Anneli & Spurkland, Anne (2018). Lck’s interactome is influenced by phosphorylation of Tyr192 in the Lck SH2 domain.
  • Borowicz, Pawel; Sundvold-Gjerstad, Vibeke; Abrahamsen, Greger; Kjelstrup, Hanna; Nyman, Tuula Anneli & Spurkland, Anne (2018). Lck’s interactome is influenced by phosphorylation of Tyr192 in the Lck SH2 domain.
  • Borowicz, Pawel; Sundvold-Gjerstad, Vibeke; Abrahamsen, Greger; Kjelstrup, Hanna; Nyman, Tuula Anneli & Spurkland, Anne (2018). Lck’s interactome is influenced by phosphorylation of Tyr192 in the Lck SH2 domain.
  • Bakketeig, Eris Aas; Wilson, Steven Ray Haakon; Lundanes, Elsa; Berg, Henriette Engen; Olsen, Christine & Reubsaet, Leon [Vis alle 8 forfattere av denne artikkelen] (2021). The setup and optimization of a complete global proteomics two-dimensional liquid chromatography system, using Spider Fractionation. Universitetet i Oslo.

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Publisert 13. mai 2016 10:37 - Sist endret 14. nov. 2023 17:21

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