Jan G. Bjaalie

Professor
Image of Jan G. Bjaalie
Norwegian version of this page
Phone +47-22851263
Mobile phone +47-91787901
Room L-165
Username
Visiting address Domus Medica Gaustad Sognsvannsveien 9 0372 Oslo
Postal address Department of Molecular Medicine P.O. Box 1105 Blindern N-0317 Oslo

Academic interests

  • Neuroinformatics: from ontologies to cyberinfrastructure for data management and sharing
  • Brain architecture: next generation digital brain atlasing
  • Wiring patterns of the brain / brain connectivity
  • Map transformations in sensory systems of the brain

Background

Education

  • 1990: Ph.D., University of Oslo (neuroanatomy)
  • 1986: M.D., University of Oslo 

Positions held

  • 2017 - : EU Human Brain Project: Leader of the Neuroinformatics Platform (2017 - 2020), Infrastructure Director (Nov 2018 -), Leader of EBRAINS Data services (2020 - )
  • 2009 - : Head of the Norwegian Neuroinformatics Node
  • 2009 - 2016: Head of Institute, Institute of Basic Medical Sciences, University of Oslo
  • 2009 - 2011: Senior advisor, International Neuroinformatics Coordinating Facility, Karolinska institutet, Stockholm, www.incf.org  www   
  • 2006 - 2008: Executive Director, International Neuroinformatics Coordinating Facility, Karolinska institutet, Stockholm
  • 2002 - 2012: Group leader of neuroinformatics, Centre for Molecular Biology and Neuroscience, Norwegian Center of Excellence, University of Oslo
  • 1999: Visiting professor, University of Antwerp and Born Bounge Foundation, Antwerp
  • 1997 - present: Professor, Neural Systems and Graphics Computing Laboratory, Department of Anatomy, University of Oslo
  • 1992 - 1997: Associate Professor, Neural Systems and Graphics Computing Laboratory, Department of Anatomy, University of Oslo 
  • 1986 - 1991: Assistant Professor, Anatomical Institute, University of Oslo

Other professional activities

  • Founding Chief Editor: Frontiers in Neuroinformatics, www.frontiersin.org/neuroinformatics 
  • Section Editor: Brain Structure and Function, Springer Verlag
  • Co-chair (2018 - 2020) and Chair (2021), International Brain Initiative, www.internationalbraininitiative.org
  • Member of Advisory Board for the International Initiative for Traumatic Brain Injury Research (InTBIR), appointed by European Commission, DG Research & Innovation (2018 -)
  • Chair of the program committee for Neuroinformatics 2012 (INCF Congress), www.neuroinformatics2012.org
  • Member of the program committee for Neuroinformatics 2011 (INCF Congress), www.neuroinformatics2011.org
  • Chair of the Governing Board of the International Neuroinformatics Coordinating Facility (2013 - 2016)
  • Norwegian representative to the Governing Board of the International Neuroinformatics Coordinating Facility (2011 - 2016)
  • Member of The Society for Neuroscience Committee on Neuroinformatics (2004 - 2009)
  • Member of expert panel Neuroanatomy Ontology, National Institute of Health (2000-2001)
  • Norwegian delegate to OECD MegaScience Forum/Global Science Forum, Neuroinformatics working groups (1997 – 2002) 

Collaboration

  • Leader of the Neuroinformatics Platform (2017 - 2020) and Infrastructure Director (Nov 2018 -) of the EU Human Brain Project
  • Partner in UiO - Faculty of Medicine SERTA (Scientific Excellence Research Thematic Area): Healthy Brain Ageing (2013 - 2019)
  • Head of the Norwegian Node of the International Neuroinformatics Coordinating Facility (2009 - present)
  • Project coordinator: High Performance Computing for Neuroinformatics, NOTUR (2001 – 2004)ject coordinator, EU-US Task Force funded workshops: “Databasing the brain” (2001, 2006)Pxx
  • PpPProject coordinator, EU-US Task Force and EC Special Support Action workshops: “Databasing the brain” (2001, 2006)
  • Partner in Norwegian Centre of Excellence (Centre for Molecular Biology and Neuroscience) 2002 - 2012 
  • Partner in EU projects (Information transfer and computation in the cerebellum, Biotech, 1998-2001; Neuroinformatics and computational neuroscience in Europe, Thematic network,2000 – 2003; Computation and plasticity in the cerebellar system, Quality of Life, 2002-2004; Human Brain Project, 2013 - )

 

Tags: Brain and nervous system, Neuroinformatics, Brain architecture, Digital brain atlasing, Life science

Publications

  • Bjerke, Ingvild Elise; Øvsthus, Martin; Papp, Eszter Agnes; Yates, Sharon Christine; Silvestri, L; Fiorilli, J; Pennartz, CMA; Pavone, FS; Puchades, Maja; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2018). Data integration through brain atlasing: Human Brain Project tools and strategies. European psychiatry.  ISSN 0924-9338.  50, s 70- 76 . doi: https://doi.org/10.1016/j.eurpsy.2018.02.004
  • Papp, Eszter Agnes; Leergaard, Trygve Brauns; Csúcs, Gergely & Bjaalie, Jan G. (2016). Brain-wide mapping of axonal connections: Workflow for automated detection and spatial analysis of labeling in microscopic sections. Frontiers in Neuroinformatics.  ISSN 1662-5196.  10(11) . doi: 10.3389/fninf.2016.00011
  • Papp, Eszter Agnes; Leergaard, Trygve Brauns; Calabrese, Evan; Johnson, G. Allan & Bjaalie, Jan G. (2014). Waxholm Space atlas of the Sprague Dawley rat brain. NeuroImage. ISSN 1053-8119.  97, s 374- 386 . doi: 10.1016/j.neuroimage.2014.04.001
  • Odeh, U. R. Francis; Leergaard, Trygve Brauns; Boy, J.; Schmidt, T.; Riess, O. & Bjaalie, Jan G. (2011). Atlas of transgenic Tet-Off Ca2+/calmodulin-dependent protein kinase II and prion protein promoter activity in the mouse brain. NeuroImage.  ISSN 1053-8119.  54(4), s 2603- 2611 . doi: 10.1016/j.neuroimage.2010.11.032
  • Zakiewicz, Izabela Maria; Van Dongen, Yvette C; Leergaard, Trygve Brauns & Bjaalie, Jan G. (2011). Workflow and Atlas System for Brain-Wide Mapping of Axonal Connectivity in Rat. PLoS ONE.  ISSN 1932-6203.  6(8) . doi: 10.1371/journal.pone.0022669
  • Kjonigsen LJ, Leergaard TB, Witter MP, Bjaalie JG. Digital atlas of anatomical subdivisions and boundaries of the rat hippocampal region.  Frontiers in Neuroinformatics, 2011; 5:2. doi: 10.3389/fninf.2011.00002
  • Odeh F, Leergaard TB, Boy J, Schmidt T, Riess O, Bjaalie JG. Atlas of transgenic Tet-Off Ca2+/calmodulin-dependent protein kinase II and prion protein promoter activity in the mouse brain. NeuroImage, 2011; 54 2603-11
  • Bjaalie, Jan G. (2008). Understanding the Brain through Neuroinformatics. Frontiers in Neuroscience.  ISSN 1662-4548.  2(1), s 19- 21 . doi: 10.3389/neuro.01.022.2008
  • Moene IA, Subramaniam S, Darine D, Leergaard TB, Bjaalie JG. Towards a workbench for rodent brain image data: systems architecture and design. Neuroinformatics 2007; 5: 35-58
  • Boy J, Leergaard TB, Schmidt T, Odeh F, Bichelmeier U, Nuber S, Holzmann C, Wree A, Prusiner SB, Bujard HB, Riess O, Bjaalie JG. Expression mapping of tetracycline-responsive protein promoter: digital atlasing as a basis for generating cell-specific disease-models. NeuroImage 2006; 33: 449-462
  • Bjaalie JG. Localization in the brain: new solutions emerging. Nature Rev Neurosci. 2002; 3:322-5
  • Royan, Muhammad Rahmad; Siddique, Khadeeja; Csucs, Gergely; Puchades, Maja ; Nourizadeh-Lillabadi, Rasoul & Bjaalie, Jan G. [Show all 9 contributors for this article] (2021). 3D Atlas of the Pituitary Gland of the Model Fish Medaka (Oryzias latipes). Frontiers in Endocrinology. ISSN 1664-2392. doi: 10.3389/fendo.2021.719843.
  • Abrams, Mathew Birdsall; Bjaalie, Jan G.; Das, Samir; Egan, Gary F.; Ghosh, Satrajit S. & Goscinski, Wojtek J. [Show all 23 contributors for this article] (2021). A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. Neuroinformatics. ISSN 1539-2791. doi: 10.1007/s12021-020-09509-0.
  • Groeneboom, Nicolaas Ervik; Yates, Sharon Christine; Puchades, Maja & Bjaalie, Jan G. (2020). Nutil: A Pre- and Post-processing Toolbox for Histological Rodent Brain Section Images. Frontiers in Neuroinformatics. ISSN 1662-5196. doi: 10.3389/fninf.2020.00037.
  • Aarestrup, FM; Albeyatti, A; Armitage, W; Auffray, C; Augello, L & Balling, Rudi [Show all 52 contributors for this article] (2020). Towards a European health research and innovation cloud (HRIC). Genome Medicine. ISSN 1756-994X. 12(18). doi: 10.1186/s13073-020-0713-z. Full text in Research Archive
  • Bjerke, Ingvild Elise; Puchades, Maja ; Bjaalie, Jan G. & Leergaard, Trygve B. (2020). Database of literature derived cellular measurements from the murine basal ganglia. Scientific Data. ISSN 2052-4463. 7. doi: 10.6084/m9.figshare.12199088.
  • Bjerke, Ingvild Elise; Yates, Sharon Christine; Laja, Arthur; Witter, Menno; Puchades, Maja & Bjaalie, Jan G. [Show all 7 contributors for this article] (2020). Densities and numbers of calbindin and parvalbumin positive neurons across the rat and mouse brain. iScience. ISSN 2589-0042. 24:101906(1), p. 1–52. doi: 10.1016/j.isci.2020.101906. Full text in Research Archive
  • Adams, Amy; Albin, Stephanie; Amunts, Katrin; Asakawa, Tasia; Bernard, Amy & Bjaalie, Jan G. [Show all 41 contributors for this article] (2020). International Brain Initiative: An Innovative Framework for Coordinated Global Brain Research Efforts. Neuron. ISSN 0896-6273. 105(2), p. 212–216. doi: 10.1016/j.neuron.2020.01.002.
  • Amunts, Katrin; Knoll, Alois C; Lippert, Thomas; Pennartz, Cyriel M.A.; Ryvlin, Philippe & Destexhe, Alain [Show all 9 contributors for this article] (2019). The Human Brain Project?Synergy between neuroscience, computing, informatics, and brain-inspired technologies. PLoS Biology. ISSN 1544-9173. 17(7). doi: 10.1371/journal.pbio.3000344. Full text in Research Archive
  • Yates, Sharon Christine; Groeneboom, Nicolaas Ervik; Coello, Christopher; Lichtenthaler, Stefan F.; Kuhn, Peer-Hendrik & Demuth, Hans-Ulrich [Show all 12 contributors for this article] (2019). QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain. Frontiers in Neuroinformatics. ISSN 1662-5196. 13. doi: 10.3389/fninf.2019.00075. Full text in Research Archive
  • Puchades, Maja ; Csúcs, Gergely; Ledergerber, Debora; Leergaard, Trygve B. & Bjaalie, Jan G. (2019). Spatial registration of serial microscopic brain images to three-dimensional reference atlases with the QuickNII tool. PLOS ONE. ISSN 1932-6203. 14(5). doi: 10.1371/journal.pone.0216796. Full text in Research Archive
  • Lillehaug, Sveinung; Yetman, Michael J.; Puchades, Maja ; Checinska, Martyna; Kleven, Heidi & Jankowsky, Joanna L. [Show all 8 contributors for this article] (2019). Data Descriptor: Brain-wide distribution of reporter expression in five transgenic tetracyclinetransactivator mouse lines. Scientific Data. ISSN 2052-4463. 6, p. 1–15. doi: 10.1038/sdata.2019.28.
  • Bjerke, Ingvild Elise; Øvsthus, Martin; Andersson, Krister Andreas; Blixhavn, Camilla Hagen; Kleven, Heidi & Yates, Sharon Christine [Show all 9 contributors for this article] (2018). Navigating the Murine Brain: Toward Best Practices for Determining and Documenting Neuroanatomical Locations in Experimental Studies. Frontiers in Neuroanatomy. ISSN 1662-5129. 12. doi: 10.3389/fnana.2018.00082. Full text in Research Archive
  • Plank, Anne-Christine; Canneva, Fabio; Raber, Kerstin; Urbach, Yvonne K; Dobner, Julia & Puchades, Maja [Show all 12 contributors for this article] (2018). Early Alterations in Operant Performance and Prominent Huntingtin Aggregation in a Congenic F344 Rat Line of the Classical CAGn51trunc Model of Huntington Disease. Frontiers in Neuroscience. ISSN 1662-4548. 12. doi: 10.3389/fnins.2018.00011. Full text in Research Archive
  • Heiland, Tina; Zeitschel, Ulrike; Puchades, Maja ; Kuhn, Peer-Hendrik; Lichtenthaler, Stefan F. & Bjaalie, Jan G. [Show all 9 contributors for this article] (2018). Defined astrocytic expression of human amyloid precursor protein in Tg2576 mouse brain. Glia. ISSN 0894-1491. 67(2), p. 393–403. doi: 10.1002/glia.23550. Full text in Research Archive
  • Bjerke, Ingvild Elise; Øvsthus, Martin; Papp, Eszter Agnes; Yates, Sharon Christine; Silvestri, L & Fiorilli, J [Show all 11 contributors for this article] (2018). Data integration through brain atlasing: Human Brain Project tools and strategies. European psychiatry. ISSN 0924-9338. 50, p. 70–76. doi: 10.1016/j.eurpsy.2018.02.0. Full text in Research Archive
  • Dempsey, Bowen; Le, Sheng; Turner, Anita; Bokiniec, Phil; Ramadas, Radhika & Bjaalie, Jan G. [Show all 11 contributors for this article] (2017). Mapping and analysis of the connectome of sympathetic premotor neurons in the rostral ventrolateral medulla of the rat using a volumetric brain atlas. Frontiers in Neural Circuits. ISSN 1662-5110. 11. doi: 10.3389/fncir.2017.00009.
  • Schubert, N; Axer, M; Schober, M; Huynh, A; Huysegoms, M & Palomero-Gallagher, N [Show all 11 contributors for this article] (2016). 3D reconstructed cyto-, muscarinic M<sub>2</sub> receptor, and fiber architecture of the rat brain registered to the waxholm space atlas. Frontiers in Neuroanatomy. ISSN 1662-5129. 10(MAY). doi: 10.3389/fnana.2016.00051.
  • Papp, Eszter Agnes; Leergaard, Trygve Brauns; Csúcs, Gergely & Bjaalie, Jan G. (2016). Brain-wide mapping of axonal connections: Workflow for automated detection and spatial analysis of labeling in microscopic sections. Frontiers in Neuroinformatics. ISSN 1662-5196. 10(11). doi: 10.3389/fninf.2016.00011. Full text in Research Archive
  • Yetman, Michael J.; Lillehaug, Sveinung; Bjaalie, Jan G.; Leergaard, Trygve Brauns & Jankowsky, Joanna L. (2016). Transgene expression in the Nop-tTA driver line is not inherently restricted to the entorhinal cortex. Brain Structure and Function. ISSN 1863-2653. 221(4), p. 2231–2249. doi: 10.1007/s00429-015-1040-9.
  • Papp, Eszter Agnes; Leergaard, Trygve Brauns; Calabrese, Evan; Johnson, G. Allan & Bjaalie, Jan G. (2015). Addendum to “Waxholm Space atlas of the Sprague Dawley rat brain” [NeuroImage 97 (2014) 374-386]. NeuroImage. ISSN 1053-8119. 105, p. 561–562. doi: 10.1016/j.neuroimage.2014.10.017.
  • Kjønigsen, Lisa Jannicke; Lillehaug, Sveinung; Bjaalie, Jan G.; Witter, Menno & Leergaard, Trygve Brauns (2015). Waxholm Space atlas of the rat brain hippocampal region: Three-dimensional delineations based on magnetic resonance and diffusion tensor imaging. NeuroImage. ISSN 1053-8119. 108, p. 441–449. doi: 10.1016/j.neuroimage.2014.12.080. Full text in Research Archive
  • Boccara, Charlotte Nina; Kjønigsen, Lisa Jannicke; Hammer, Ingvild Marie F.; Bjaalie, Jan G.; Leergaard, Trygve Brauns & Witter, Menno (2015). A three-plane architectonic atlas of the rat hippocampal region. Hippocampus. ISSN 1050-9631. 25(7), p. 838–857. doi: 10.1002/hipo.22407.
  • Zakiewicz, Izabela Maria; Majka, Piotr; Wòjcik, Daniel K.; Bjaalie, Jan G. & Leergaard, Trygve Brauns (2015). Three-Dimensional Histology Volume Reconstruction of Axonal Tract Tracing Data: Exploring Topographical Organization in Subcortical Projections from Rat Barrel Cortex. PLOS ONE. ISSN 1932-6203. 10(9). doi: 10.1371/journal.pone.0137571.
  • Tiesinga, Paul; Bakker, Rembrandt; Hill, Sean & Bjaalie, Jan G. (2015). Feeding the human brain model. Current Opinion in Neurobiology. ISSN 0959-4388. 32, p. 107–114. doi: 10.1016/j.conb.2015.02.003.
  • Sergejeva, Marina; Papp, Eszter Agnes; Bakker, Rembrandt; Gaudnek, Manuel A.; Okamura-Oho, Yuko & Boline, Jyl [Show all 8 contributors for this article] (2015). Anatomical landmarks for registration of experimental image data to volumetric rodent brain atlasing templates. Journal of Neuroscience Methods. ISSN 0165-0270. 240, p. 161–169. doi: 10.1016/j.jneumeth.2014.11.005.
  • Zakiewicz, Izabela Maria; Bjaalie, Jan G. & Leergaard, Trygve Brauns (2014). Brain-wide map of efferent projections from rat barrel cortex. Frontiers in Neuroinformatics. ISSN 1662-5196. 8. doi: 10.3389/fninf.2014.00005.
  • Lillehaug, Sveinung; Syverstad, Gry-Helen Enger; Nilsson, Lars; Bjaalie, Jan G.; Leergaard, Trygve Brauns & Torp, Reidun (2014). Brainwide distribution and variance of amyloid-beta deposits in tg-ArcSwe mice. Neurobiology of Aging. ISSN 0197-4580. 35(3), p. 556–564. doi: 10.1016/j.neurobiolaging.2013.09.013.
  • Papp, Eszter Agnes; Leergaard, Trygve Brauns; Calabrese, Evan; Johnson, G. Allan & Bjaalie, Jan G. (2014). Waxholm Space atlas of the Sprague Dawley rat brain. NeuroImage. ISSN 1053-8119. 97, p. 374–386. doi: 10.1016/j.neuroimage.2014.04.001.
  • White, NS; Leergaard, Trygve Brauns; D'Arceuil, Helen; Bjaalie, Jan G. & Dale, AM (2013). Probing tissue microstructure with Restriction Spectrum Imaging: Histological and theoretical validation. Human Brain Mapping. ISSN 1065-9471. 34(2), p. 327–346. doi: 10.1002/hbm.21454.
  • Nagelhus, Erlend Arnulf; Amiry-Moghaddam, Mahmood ; Bergersen, Linda Hildegard; Bjaalie, Jan G.; Eriksson, Jens & Gundersen, Vidar [Show all 12 contributors for this article] (2013). The glia doctrine: Addressing the role of glial cells in healthy brain ageing. Mechanisms of Ageing and Development. ISSN 0047-6374. 134(10), p. 449–459. doi: 10.1016/j.mad.2013.10.001.
  • Stensrud, Mats Julius; Chaudhry, Farrukh Abbas; Leergaard, Trygve Brauns; Bjaalie, Jan G. & Gundersen, Vidar (2013). Vesicular glutamate transporter-3 in the rodent brain: Vesicular colocalization with vesicular -aminobutyric acid transporter. Journal of Comparative Neurology. ISSN 0021-9967. 521(13), p. 3042–3056. doi: 10.1002/cne.23331.
  • Hines, Kim Eigard; Bolle, Erlend; Rissi, Michael; Volgyes, David; Dorholt, Ole & Røhne, Ole Myren [Show all 9 contributors for this article] (2013). COMPET: High resolution high sensitivity MRI compatible pre-clinical PET scanner. Nuclear Instruments and Methods in Physics Research Section A : Accelerators, Spectrometers, Detectors and Associated Equipment. ISSN 0168-9002. 732, p. 581–585. doi: 10.1016/j.nima.2013.05.148.

View all works in Cristin

  • Sand, Olav; Sjaastad, Øystein; Haug, Egil & Bjaalie, Jan G. (2019). Anatomi og fysiologi - Menneskekroppen, 4. utgave. Gads forlag. ISBN 9788712058328. 666 p.
  • Sjaastad, Øystein; Toverud, Kari C.; Sand, Olav; Bjaalie, Jan G. & Egil, Haug (2018). Arbeidsbok til Menneskekroppen - Fysiologi og anatomi, 3. utgave. Gyldendal Akademisk. ISBN 978-82-05-51403-4. 224 p.
  • Sand, Olav; Sjaastad, Øystein; Haug, Egil & Bjaalie, Jan G. (2018). Menneskekroppen - Fysiologi og anatomi, 3. utgave. Gyldendal Akademisk. ISBN 978-82-05-50482-0. 666 p.
  • Sjaastad, Øystein; Toverud, Kari C.; Sand, Olav; Bjaalie, Jan G. & Egil, Haug (2015). Studieoppgaver til Menneskets anatomi og fysiologi. Gads forlag. ISBN 9788712050353. 203 p.
  • Sand, Olav; Sjaastad, Øystein; Haug, Egil & Bjaalie, Jan G. (2015). Menneskets anatomi og fysiologi 3. utgave. Gads Forlag. ISBN 978-87-12-05107-7. 538 p.

View all works in Cristin

  • Puchades, Maja ; Yates, Sharon Christine; Bjerke, Ingvild Elise; Groeneboom, Nicolaas; Csucs, Gergely & Leergaard, Trygve B. [Show all 7 contributors for this article] (2021). Implementing the QUINT workflow for spatial quantitative analysis of labelling in mice and rats.
  • Schlegel, Ulrike; Köhnen, Stefan; Davison, Andrew P.; Najafi, Peyman; Weyers, Benjamin & Gründling, Jan [Show all 17 contributors for this article] (2021). openMINDS - flexible metadata models for neuroscience.
  • Reiten, Ingrid; Schlegel, Ulrike; Blixhavn, Camilla Hagen; Andersson, Krister Andreas; Aasebø, Ida Elisabeth Jørgensen & Yates, Sharon Christine [Show all 12 contributors for this article] (2020). Data sharing through the online EBRAINS platform: a new service for brain research.
  • Gurdon, Brianna; Hadad, Niran; Telpoukhovskaia, Maria; Yates, Sharon Christine; Puchades, Maja & Bjaalie, Jan G. [Show all 7 contributors for this article] (2020). Brain-wide spatial analysis to identify region-specific changes in cell composition associated with resilience to Alzheimer’s disease in the AD-BXD mouse population.
  • Einevoll, Gaute; Bjaalie, Jan G. & Plesser, Hans Ekkehard (2020). Om hjerneforskning og Human Brain Project . [Internet]. Podcast: Vett og vitenskap med Gaute Einevoll.
  • Bjaalie, Jan G. (2020). International Brain Initiative: Facilitating Global Neuroscience Engagement.
  • Bjaalie, Jan G. (2020). Sharing and publishing human brain data through the EBRAINS research infrastructure (GDPR impact conference).
  • Schlegel, Ulrike; Reiten, Ingrid; Aasebø, Ida Elisabeth Jørgensen; Blixhavn, Camilla Hagen; Zehl, Lyuba & Kjelsberg, Kasper [Show all 13 contributors for this article] (2020). EBRAINS data sharing: benefits and workflow.
  • Yates, Sharon Christine; Groeneboom, Nicolaas; Csucs, Gergely; Leergaard, Trygve B.; Kreshuk, Anna & Kutra, Dominik [Show all 8 contributors for this article] (2020). New functionalities i the QUINT workflow for brain atlas based image analysis.
  • Reiten, Ingrid; Schlegel, Ulrike; Aasebø, Ida Elisabeth Jørgensen; Blixhavn, Camilla Hagen; Zehl, Lyuba & Kjelsberg, Kasper [Show all 13 contributors for this article] (2020). Neuroscience community-gains from data sharing through the EBRAINS infrastructure.
  • Schlegel, Ulrike; Blixhavn, Camilla Hagen; Andersson, Krister Andreas; Yates, Sharon Christine; Øvsthus, Martin & Bjerke, Ingvild Elise [Show all 11 contributors for this article] (2019). Integrating and analysing heterogeneous rodent neuroscience data using three-dimensional brain reference atlases.
  • Andersson, Krister Andreas; Blixhavn, Camilla Hagen; Kleven, Heidi; Schlegel, Ulrike; Oliver, Schmid & Puchades, Maja [Show all 10 contributors for this article] (2019). EBRAINS fair data service: A novel infrastructure for making neuroscience data findable, accessible, interoperable, and reuseable.
  • Andersson, Krister Andreas; Blixhavn, Camilla Hagen; Kleven, Heidi; Zehl, Lyuba; Bjerke, Ingvild Elise & Schmid, Oliver [Show all 17 contributors for this article] (2019). Neuroinformatics platform for making neuroscience data Findable, Accessible, Interoperable, and Reuseable.
  • Andersson, Krister Andreas; Blixhavn, Camilla Hagen; Zehl, Lyuba; Zarfarnia, Sara; Köhnen, Stefan & Hilverling, Anna [Show all 19 contributors for this article] (2019). Resources for making neuroscience data FAIR. The Human Brain Project invites researchers to share, find, and use data via the new EBRAINS infrastructure.
  • Puchades, Maja ; Yates, Sharon Christine; Groeneboom, Nicolaas; Csúcs, Gergely; Leergaard, Trygve B. & Bjaalie, Jan G. (2019). Workflow for quantification and spatial analysis of labeling in large series of histological images from murine brains.
  • Blixhavn, Camilla Hagen; Andersson, Krister Andreas; Kleven, Heidi; Schlegel, Ulrike; Puchades, Maja & Bjaalie, Jan G. [Show all 7 contributors for this article] (2019). Find and explore rodent brain data using 3D atlases in the new EBRAINS infrastructure.
  • Blixhavn, Camilla Hagen; Andersson, Krister Andreas; Kleven, Heidi; Schlegel, Ulrike; Puchades, Maja & Bjaalie, Jan G. [Show all 7 contributors for this article] (2019). Infrastructure and workflow for integrating and navigating multi-scale and multi-modal murine neuroscience data using 3D digital brain reference atlases.
  • Yates, Sharon Christine; Groeneboom, Nicolaas; Csúcs, Gergely; Leergaard, Trygve B.; Puchades, Maja & Bjaalie, Jan G. (2019). Batch quantification and spatial analysis of labelling in microscopic rodent brain sections .
  • von Linstow, Christian Ulrich; Yates, Sharon Christine; Leergaard, Trygve B.; Plank, A-C; von Hörsten, S. & Puchades, Maja [Show all 7 contributors for this article] (2018). Whole brain analysis of Huntingtin aggregates in the F344 transgenic rat model of Huntington’s disease.
  • Bjerke, Ingvild Elise; Øvsthus, Martin; Andersson, Krister Andreas; Bjaalie, Jan G. & Leergaard, Trygve B. (2018). Best practices for determining and documenting neuroanatomical locations in the rodent brain.
  • Blixhavn, Camilla Hagen; Andersson, Krister; Øvsthus, Martin; Bjerke, Ingvild Elise; Kleven, Heidi & Puchades, Maja [Show all 8 contributors for this article] (2018). Data integration through digital brain atlasing: Making diverse neuroscience data discoverable using Human Brain Project infrastructure.
  • Øvsthus, Martin; Bjerke, Ingvild Elise; Yates, Sharon Christine; Bjaalie, Jan G. & Leergaard, Trygve Brauns (2018). Mapping topographical organization in mouse brain subcortical axonal projections using Human Brain Project infrastructure.
  • Bjaalie, Jan G. (2018). Data sharing in neuroscience: traditions, standards, and transformations.
  • Yates, Sharon Christine; Puchades, Maja ; kreshuk, anna; Kutra, Dominik; Leergaard, Trygve B. & Bjaalie, Jan G. [Show all 7 contributors for this article] (2018). HBP Analytic Workflow: from Microscopic Image Data to Extracted Features in Atlas Space.
  • Zehl, Lyuba; Zafarnia, Sara; Köhnen, Stefan; Andersson, Krister Andreas; Markovic, Milica & Legouée, Elodie [Show all 20 contributors for this article] (2018). Integrating neuroscientific data into a unified database: from individual experiments to a standardized metadata collection using the Human Brain Project Neuroinformatics Platform.
  • Zehl, Lyuba; Zafarnia, Sara; Köhnen, Stefan; Andersson, Krister Andreas; Markovic, Milica & Legouée, Elodie [Show all 20 contributors for this article] (2018). Integrating neuroscientific data into a unified database: from individual experiments to a standardized metadata collection using the Human Brain Project Neuroinformatics Platform.
  • Andersson, Krister Andreas; Blixhavn, Camilla Hagen; Zehl, Lyuba; Markovic, Milica; Kleven, Heidi & Zafarnia, Sara [Show all 15 contributors for this article] (2018). HBP Curation service: Share your data via the Neuroinformatics platform.
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Published Apr. 13, 2011 2:40 PM - Last modified Oct. 17, 2021 10:17 PM