Neuronify - work on neural simulations without prior computational experience.
Available for smartphones, iphone, linux, windows, mac.
- Download: http://ovilab.net/neuronify/
- Source code: https://github.com/cinpla/neuronify/
- Publication: Dragly et al., (2017) Neuronify: An Educational Simulator for Neural Circuits
Open source modules for tracking animal behavior and closed-loop stimulation based on Open Ephys and Bonsai.
- Buccino et al., 2018 https://doi.org/10.1088/1741-2552/aacf45
- Wiki page on github containing a detailed guide on how to set up the system
Exdir: Experimental Directory Structure (Exdir): an alternative to HDF5
- Publication: Dragly et al (2018) https://doi.org/10.3389/fninf.2018.00016
- https://github.com/CINPLA/exdir/
Expipe: A Lightweight Data Management Platform to Simplify the Steps From Experiment to Data Analysis
- Lepperød et al (2020) https://doi.org/10.3389/fninf.2020.00030