Jukka Corander

Bilde av Jukka Corander
English version of this page
Brukernavn
Besøksadresse Sognsvannsveien 9 Domus Medica 0372 OSLO
Postadresse Postboks 1122 Blindern 0317 OSLO

Mer information på engelska.

Publikasjoner

  • Chewapreecha, Claire; Holden, Matthew T.G.; Vehkala, Minna; Välimäki, Niko; Yang, Zhirong; Harris, Simon R.; Mather, Alison E.; Tuanyok, Apichai; De Smet, Birgit; Le Hello, Simon; Bizet, Chantal; Mayo, Mark; Wuthiekanun, Vanaporn; Limmathurotsakul, Direk; Phetsouvanh, Rattanaphone; Spratt, Brian G.; Corander, Jukka; Keim, Paul; Dougan, Gordon; Dance, David A.B.; Currie, Bart J.; Parkhill, Julian & Peacock, Sharon J. (2017). Global and regional dissemination and evolution of Burkholderia pseudomallei. Nature Microbiology.  ISSN 2058-5276.  2:16263, s 1- 8 . doi: 10.1038/nmicrobiol.2016.263
  • Corander, Jukka; Fraser, Christophe; Gutmann, Michael U.; Arnold, Brian; Hanage, William P; Bentley, Stephen D; Lipsitch, Marc & Croucher, Nicholas J (2017). Frequency-dependent selection in vaccine-associated pneumococcal population dynamics. Nature Ecology & Evolution.  ISSN 2397-334X.  1(12), s 1950- 1960 . doi: 10.1038/s41559-017-0337-x
  • Duplouy, Anne; Wong, Swee C; Corander, Jukka; Lehtonen, Rainer & Hanski, Ilkka (2017). Genetic effects on life-history traits in the Glanville fritillary butterfly. PeerJ.  ISSN 2167-8359.  2017(5) . doi: 10.7717/peerj.3371
  • Gutmann, Michael; Dutta, Ritabrata; Kaski, Samuel & Corander, Jukka (2017). Likelihood-free inference via classification. Statistics and computing.  ISSN 0960-3174.  s 1- 15 . doi: 10.1007/s11222-017-9738-6
  • Kallonen, Teemu Ville Sakari; Brodrick, Hayley J; Harris, Simon R.; Corander, Jukka; Brown, Nicholas M; Martin, Veronique; Peacock, Sharon J. & Parkhill, Julian (2017). Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. Genome Research.  ISSN 1088-9051.  27(8), s 1437- 1449 . doi: 10.1101/gr.216606.116
  • Leppä-aho, Janne; Pensar, Johan; Roos, Teemu & Corander, Jukka (2017). Learning Gaussian graphical models with fractional marginal pseudo-likelihood. International Journal of Approximate Reasoning.  ISSN 0888-613X.  83, s 21- 42 . doi: 10.1016/j.ijar.2017.01.001
  • Lintusaari, Jarno; Gutmann, Michael U.; Dutta, Ritabrata; Kaski, Samuel & Corander, Jukka (2017). Fundamentals and recent developments in approximate Bayesian computation. Systematic Biology.  ISSN 1063-5157.  66(1), s e66- e82 . doi: 10.1093/sysbio/syw077
  • Mohandesan, Elmira; Fitak, Robert R; Corander, Jukka; Yadamsuren, Adiya; Chuluunbat, Battsetseg; Abdelhadi, Omer; Raziq, Abdul; Nagy, Peter; Stalder, Gabrielle; Walzer, Chris; Faye, Bernard & Burger, Pamela A (2017). Mitogenome Sequencing in the Genus Camelus Reveals Evidence for Purifying Selection and Long-term Divergence between Wild and Domestic Bactrian Camels. Scientific Reports.  ISSN 2045-2322.  7(1) . doi: 10.1038/s41598-017-08995-8
  • Mostowy, Rafal; Croucher, Nicholas J.; Andam, Cheryl P; Corander, Jukka; Hanage, William P & Marttinen, Pekka (2017). Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations. Molecular biology and evolution.  ISSN 0737-4038.  34(5), s 1167- 1182 . doi: 10.1093/molbev/msx066
  • Murray, Susan; Pascoe, Ben; Meric, Guillaume; Mageiros, Leonardos; Yahara, Koji; Hitchings, Matthew D; Friedmann, Yasmin; Wilkinson, Thomas S; Gormley, Fraser J; Mack, Dietrich; Bray, James E.; Lamble, Sarah; Bowden, Rory; Jolley, Keith A.; Maiden, Martin C.J.; Wendlandt, Sarah; Schwarz, Stefan; Corander, Jukka; Fitzgerald, J. Ross & Sheppard, Samuel K (2017). Recombination-mediated host adaptation by avian staphylococcus aureus. Genome Biology and Evolution.  ISSN 1759-6653.  9(4), s 830- 842 . doi: 10.1093/gbe/evx037
  • Pensar, Johan; Nyman, Henrik & Corander, Jukka (2017). Structure Learning of Contextual Markov Networks using Marginal Pseudo-likelihood. Scandinavian Journal of Statistics.  ISSN 0303-6898.  44(2), s 455- 479 . doi: 10.1111/sjos.12260
  • Pensar, Johan; Nyman, Henrik; Niiranen, Juha & Corander, Jukka (2017). Marginal pseudo-likelihood learning of discrete Markov network structures. Bayesian Analysis.  ISSN 1936-0975.  12(4), s 1195- 1215 . doi: 10.1214/16-BA1032
  • Reiseter, Silje; Gunnarsson, Ragnar; Aaløkken, Trond Mogens; Samersaw-Lund, May Brit; Mynarek, Georg; Corander, Jukka; Haydon, Joanna & Molberg, Øyvind (2017). Progression and mortality of interstitial lung disease in mixed connective tissue disease: a long-term observational nationwide cohort study.. Rheumatology.  ISSN 1462-0324.  57, s 255- 262 . doi: 10.1093/rheumatology/kex077
  • Reiseter, Silje; Gunnarsson, Ragnar; Corander, Jukka; Haydon, Joanna; Samersaw-Lund, May Brit; Aaløkken, Trond Mogens; Taraldsrud, Eli; Hetlevik, Siri Opsahl & Molberg, Øyvind (2017). Disease evolution in mixed connective tissue disease: Results from a long-term nationwide prospective cohort study. Arthritis Research & Therapy.  ISSN 1478-6362.  19(1) . doi: 10.1186/s13075-017-1494-7
  • Skwark, Marcin J.; Croucher, Nicholas J.; Puranen, Santeri; Chewapreecha, Claire; Pesonen, Maiju; Xu, Ying Ying; Turner, Paul; Harris, Simon R.; Beres, Stephen B.; Musser, James M.; Parkhill, Julian; Bentley, Stephen D.; Aurell, Erik & Corander, Jukka (2017). Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis. PLoS Genetics.  ISSN 1553-7390.  13:e1006508(2), s 1- 24 . doi: 10.1371/journal.pgen.1006508
  • Tietavainen, A; Gutmann, Michael U.; Keski-Vakkuri, Esko; Corander, Jukka & Hæggstrom, Edward (2017). Bayesian inference of physiologically meaningful parameters from body sway measurements. Scientific Reports.  ISSN 2045-2322.  7(1) . doi: 10.1038/s41598-017-02372-1
  • Wei, Lu; Pitaval, Renaud-Alexandre; Corander, Jukka & Tirkkonen, Olav (2017). From random matrix theory to coding theory: Volume of a metric ball in unitary group. IEEE Transactions on Information Theory.  ISSN 0018-9448.  63(5), s 2814- 2821 . doi: 10.1109/TIT.2017.2681900
  • Zheng, Zhong; Wei, Lu; Speicher, Roland; Müller, Ralf Reiner; Hamalainen, J. & Corander, Jukka (2017). Asymptotic analysis of rayleigh product channels: A free probability approach. IEEE Transactions on Information Theory.  ISSN 0018-9448.  63(3), s 1731- 1745 . doi: 10.1109/TIT.2016.2646699
  • Beres, Stephen B; Kachroo, Priyanka; Nasser, Waleed; Olsen, Randall J; Zhu, Luchang; Flores, Anthony R; de la Riva, Ivan; Paez-Mayorga, Jesus; Jimenez, Francisco E; Cantu, Concepcion; Vuopio, Jaana; Jalava, Jari; Kristinsson, Karl G; Gottfredsson, Magnus; Corander, Jukka; Fittipaldi, Nahuel; Di Luca, Maria Chiara; Petrelli, Dezemona; Vitali, Luca A; Raiford, Annessa; Jenkins, Leslie & Musser, James M (2016). Transcriptome remodeling contributes to epidemic disease caused by the human pathogen Streptococcus pyogenes. mBio.  ISSN 2150-7511.  7(3) . doi: 10.1128/mBio.00403-16
  • Connor, Thomas R; Owen, Sian V; Langridge, Gemma; Connell, Steve; Nair, Satheesh; Reuter, Sandra; Dallman, Timothy J; Corander, Jukka; Tabing, Kristine C; Le Hello, Simon; Fookes, Maria; Doublet, Benoit; Zhou, Zhemin; Feltwell, Theresa; Ellington, Matthew J; Herrera, Silvia; Gilmour, Matthew; Cloeckaert, Axel; Achtman, Mark; Parkhill, Julian; Wain, John; De Pinna, Elizabeth; Weill, François-Xavier; Peters, Tansy & Thomson, Nick (2016). What’s in a name? Species-wide whole-genome sequencing resolves invasive and noninvasive lineages of Salmonella enterica serotype Paratyphi B. mBio.  ISSN 2150-7511.  7(4) . doi: 10.1128/mBio.00527-16
  • Corander, Jukka; Hyttinen, Antti; Kontinen, Juha; Pensar, Johan & Väänänen, Jouko (2016). A logical approach to context-specific independence. Lecture Notes in Computer Science.  ISSN 0302-9743.  9803, s 165- 182 . doi: 10.1007/978-3-662-52921-8_11
  • Gutmann, Michael & Corander, Jukka (2016). Bayesian Optimization for Likelihood-Free Inference of Simulator-Based Statistical Models. Journal of machine learning research.  ISSN 1532-4435.  17(125), s 1- 47
  • Heinävaara, Otte; Leppä-aho, Janne; Corander, Jukka & Honkela, Antti (2016). On the inconsistency of ℓ1-penalised sparse precision matrix estimation. BMC Bioinformatics.  ISSN 1471-2105.  17:448(S16), s 99- 107 . doi: 10.1186/s12859-016-1309-x
  • Lees, John A; Vehkala, Minna; Välimäki, Niko; Harris, Simon R; Chewapreecha, Claire; Croucher, Nicholas J; Marttinen, Pekka; Davies, Mark R.; Steer, Andrew C; Tong, Steven Y C; Honkela, Antti; Parkhill, Julian; Bentley, Stephen D & Corander, Jukka (2016). Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes. Nature Communications.  ISSN 2041-1723.  7 . doi: 10.1038/ncomms12797 Fulltekst i vitenarkiv.
  • McNally, Alan; Oren, Yaara; Kelly, Darren; Pascoe, Ben; Dunn, Steven; Sreecharan, Tristan; Vehkala, Minna; Välimäki, Niko; Prentice, Michael B; Ashour, Amgad; Avram, Oren; Pupko, Tal; Dobrindt, Ulrich; Literak, Ivan; Guenther, Sebastian; Schaufler, Katharina; Wieler, Lothar H; Zhiyong, Zong; Sheppard, Samuel K; McInerney, James O & Corander, Jukka (2016). Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations. PLoS Genetics.  ISSN 1553-7390.  12(9) . doi: 10.1371/journal.pgen.1006280 Fulltekst i vitenarkiv.
  • Pitaval, Renaud-Alexandre; Wei, Lu; Tirkkonen, Olav & Corander, Jukka (2016). Volume of metric balls in high-dimensional complex grassmann manifolds. IEEE Transactions on Information Theory.  ISSN 0018-9448.  62(9), s 5105- 5116 . doi: 10.1109/TIT.2016.2594289
  • Yang, Zhirong; Corander, Jukka & Oja, Erkki (2016). Low-rank doubly stochastic matrix decomposition for cluster analysis. Journal of machine learning research.  ISSN 1532-4435.  17
  • Howell, Kate J.; Weinert, Lucy A.; Chaudhuri, Roy R.; Luan, Shi-Lu; Peters, Sarah E.; Corander, Jukka; Harris, David; Angen, Øystein; Aragon, Virginia; Bensaid, Albert; Williamson, Susanna M.; Parkhill, Julian; Langford, Paul R.; Rycroft, Andrew N.; Wren, Brendan W.; Holden, Matthew T.G.; Tucker, Alexander W. & Maskell, Duncan J. (2014). The use of genome wide association methods to investigate pathogenicity, population structure and serovar in Haemophilus parasuis. BMC Genomics.  ISSN 1471-2164.  15:1179 . doi: 10.1186/1471-2164-15-1179

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Publisert 11. apr. 2016 12:35 - Sist endret 11. apr. 2016 15:40