Mohamed Abdelhalim

Overingeniør - Stamcelleepigenetikk
English version of this page
Telefon +47-22851064
Brukernavn
Besøksadresse Sognsvannsveien 9 Domus Medica 0372 Oslo
Postadresse Postboks 1112 Blindern 0317 Oslo

About me

Bioinformatics with a doctorate in genetics from the Norwegian University of Life Sciences (NMBU) and M.Sc. in cancer biology from the University of Oslo. Works with next generation sequencing data (RNA-seq and ChIP-seq) in time series analyses. Has experience with a wide range of statistical genomics and programming methods.

Publikasjoner

  • Rossini, Roberto; Oshaghi, Mohammadsaleh; Nekrasov, Maxim; Bellanger, Aurelie Nathalie Pascale; Domaschenz, Renae & Dijkwel, Yasmin [Vis alle 10 forfattere av denne artikkelen] (2023). Multi-level 3D genome organization deteriorates during breast cancer progression. bioRxiv. ISSN 2692-8205. doi: 10.1101/2023.11.26.568711.
  • Fracassi, C; Ugge', M; Abdelhalim, Mohamed Ibrahim Mohamed; Zapparoli, E; Simoni, M & Magliulo, D [Vis alle 11 forfattere av denne artikkelen] (2023). PML modulates epigenetic composition of chromatin to regulate expression of pro-metastatic genes in triple-negative breast cancer. Nucleic Acids Research (NAR). ISSN 0305-1048. 51(20), s. 11024–11039. doi: 10.1093/nar/gkad819. Fulltekst i vitenarkiv
  • Benarroch, Louise; Madsen-Østerbye, Julia-Kristina; Abdelhalim, Mohamed Ibrahim Mohamed; Mamchaoui, Kamel; Ohana, Jessica & Bigot, Anne [Vis alle 10 forfattere av denne artikkelen] (2023). Cellular and Genomic Features of Muscle Differentiation from Isogenic Fibroblasts and Myoblasts. Cells. ISSN 2073-4409. 12(15). doi: 10.3390/cells12151995. Fulltekst i vitenarkiv
  • Madsen-Østerbye, Julia-Kristina; Abdelhalim, Mohamed Ibrahim Mohamed; Hazell Pickering, Sarah Jai & Collas, Philippe (2023). Gene Regulatory Interactions at Lamina-Associated Domains. Genes. ISSN 2073-4425. 14(2), s. 1–15. doi: 10.3390/genes14020334. Fulltekst i vitenarkiv
  • Madsen-Østerbye, Julia-Kristina; Abdelhalim, Mohamed Ibrahim Mohamed; Baudement, Marie-Odile & Collas, Philippe (2022). Local euchromatin enrichment in lamina-associated domains anticipates their repositioning in the adipogenic lineage. Genome Biology. ISSN 1465-6906. 23, s. 1–19. doi: 10.1186/s13059-022-02662-6. Fulltekst i vitenarkiv
  • Abdelhalim, Mohamed Ibrahim Mohamed; Brurberg, May Bente; Hofgaard, Ingerd Skow; Rognli, Odd Arne & Tronsmo, Anne Marte (2020). Pathogenicity, host specificity and genetic diversity in Norwegian isolates of Microdochium nivale and Microdochium majus. European journal of plant pathology. ISSN 0929-1873. 156(3), s. 885–895. doi: 10.1007/s10658-020-01939-5. Fulltekst i vitenarkiv
  • Abdelhalim, Mohamed; Rognli, Odd Arne; Hofgaard, Ingerd Skow; Østrem, Liv & Tronsmo, Anne Marte (2016). Snow mould resistance under controlled conditions and winter survival in the field in populations of perennial ryegrass, meadow fescue and Festulolium are partly dependent on ploidy level and degree of northern adaptation. Canadian Journal of Plant Science. ISSN 0008-4220. 96(4), s. 579–589. doi: 10.1139/cjps-2015-0259.
  • Kovi, Mallikarjuna Rao; Abdelhalim, Mohamed; Kunapareddy, Anil; Ergon, Åshild; Tronsmo, Anne Marte & Brurberg, May Bente [Vis alle 9 forfattere av denne artikkelen] (2016). Global transcriptome changes in perennial ryegrass during early infection by pink snow mould. Scientific Reports. ISSN 2045-2322. 6:28702. doi: 10.1038/srep28702. Fulltekst i vitenarkiv

Se alle arbeider i Cristin

  • Abdelhalim, Mohamed Ibrahim Mohamed; Kovi, Mallikarjuna Rao; Brurberg, May Bente; Ergon, Åshild; Rognli, Odd Arne & Tronsmo, Anne Marte (2014). Quantification of fungal biomass by qPCR and the expression of disease resistance genes during early infection by Microdochium nivale.
  • Tronsmo, Anne Marte; Abdelhalim, Mohamed; Brurberg, May Bente; Ergon, Åshild; Hofgaard, Ingerd Skow & Rao, Kovi Mallikarjuna (2014). Mitigating the risk of snow mould damage in high yielding grass species adapted for future climate.
  • Tronsmo, Anne Marte; Abdelhalim, Mohamed; Brurberg, May Bente; Ergon, Åshild; Hofgaard, Ingerd Skow & Rao, Kovi Mallikarjuna (2014). Mitigating the risk of snow mould damage in high yielding grass species adapted for future climate. Third Nordic International Conference on Climate Change Adaptation, Adapting to Change: From Research to Decision-making. Copenhagen, Denmark. 25-27. August 2014. Abstracts.
  • Kovi, Mallikarjuna Rao; Ergon, Åshild; Kunapareddy, Anil; Abdelhalim, Mohamed; Asp, Torben & Tronsmo, Anne Marte [Vis alle 7 forfattere av denne artikkelen] (2013). Global transcriptome changes in perennial ryegrass during early infection by pink snow mould.
  • Kovi, Mallikarjuna Rao; Ergon, Åshild; Kunapareddy, Anil; Abdelhalim, Mohamed; Asp, Torben & Tronsmo, Anne Marte [Vis alle 7 forfattere av denne artikkelen] (2013). Transcriptome analysis of infected perennial ryegrass with M.nivale through RNA Seq. approach.
  • Abdelhalim, Mohamed; Ergon, Åshild; Kovi, Mallikarjuna Rao; Kunapareddy, Anil; Brurberg, May Bente & Hofgaard, Ingerd [Vis alle 8 forfattere av denne artikkelen] (2012). Gene expression analysis of perennial ryegrass (Lolium perenne L.) during pink snow mould infection.
  • Abdelhalim, Mohamed Ibrahim Mohamed; Tronsmo, Anne Marte; Rognli, Odd Arne; Brurberg, May Bente; Hofgaard, Ingerd Skow & Marum, Petter [Vis alle 7 forfattere av denne artikkelen] (2016). Snow mould resistance in perennial grasses for future climates. NMBU. ISSN 1894-6402.

Se alle arbeider i Cristin

Publisert 5. okt. 2020 14:02 - Sist endret 26. feb. 2024 12:33