Siste publikasjoner

• Sisodiya, Sanjay M.; Fowler, Hayley J.; Lake, Iain; Nanji, Rosemary O.; Gawel, Kinga Aurelia; Esguerra, Camila Vicencio; Newton, Charles & Foley, Aideen (2019). Climate change and epilepsy: Time to take action. Epilepsia Open.  ISSN 2470-9239.  s 1- 13 . doi: 10.1002/epi4.12359
• Fornes, Oriol; Castro Mondragón, Jaime Abraham; Khan, Aziz; Robin van der, Lee; Zhang, Xi; A. Richmond, Phillip; P. Modi, Bhavi; Correard, Solenne; Gheorghe, Marius; Baranasic, Damir; Santana-Garcia, Walter; Tan, Ge; Cheneby, Jeanne; Ballester, Benoit; Parcy, François; Sandelin, Albin; Lenhard, Boris; Wasserman, Wyeth W. & Mathelier, Anthony (2019). JASPAR 2020: update of the open-access database of transcription factor binding profiles. Nucleic Acids Research.  ISSN 0305-1048. . doi: 10.1093/nar/gkz1001 Vis sammendrag

  JASPAR (http://jaspar.genereg.net) is an open-access database of curated, non-redundant transcription factor (TF)-binding profiles stored as position frequency matrices (PFMs) for TFs across multiple species in six taxonomic groups. In this 8th release of JASPAR, the CORE collection has been expanded with 245 new PFMs (169 for vertebrates, 42 for plants, 17 for nematodes, 10 for insects, and 7 for fungi), and 156 PFMs were updated (125 for vertebrates, 28 for plants and 3 for insects). These new profiles represent an 18% expansion compared to the previous release. JASPAR 2020 comes with a novel collection of unvalidated TF-binding profiles for which our curators did not find orthogonal supporting evidence in the literature. This collection has a dedicated web form to engage the community in the curation of unvalidated TF-binding profiles. Moreover, we created a Q&A forum to ease the communication between the user community and JASPAR curators. Finally, we updated the genomic tracks, inference tool, and TF-binding profile similarity clusters. All the data is available through the JASPAR website, its associated RESTful API, and through the JASPAR2020 R/Bioconductor package.

• Gawel, Kinga Aurelia; Banono, Nancy Saana; Michalak, Agnieszka & Esguerra, Camila Vicencio (2019). A critical review of zebrafish schizophrenia models: Time for validation?. Neuroscience and Biobehavioral Reviews.  ISSN 0149-7634.  107, s 6- 22 . doi: 10.1016/j.neubiorev.2019.08.001
• Rydmark, Marcella Orwick; Christensen, Mikkel Killingmoe; Köksal, Elif; Kantarci, Ilayda; Yantchev, Ventsislav; Jesorka, Aldo & Gözen, Irep (2019). Styrene maleic acid copolymer induces pores in biomembranes. Soft Matter.  ISSN 1744-683X.  39, s 7934- 7944 . doi: 10.1039/C9SM01407A
• Köksal, Elif; Belletati, Patrícia Fernandes; Reint, Ganna; Olsson, Ragni; Leitl, Kira; Kantarci, Ilayda & Gözen, Irep (2019). Spontaneous Formation and Rearrangement of Artificial Lipid Nanotube Networks as a Bottom-Up Model for Endoplasmic Reticulum. Journal of Visualized Experiments.  ISSN 1940-087X.  2019(143), s 1- 9 . doi: 10.3791/58923
• Bösl, Korbinian; Ianevski, Aleksandr; Than, Thoa T.; Andersen, Petter I.; Kuivanen, Suvi; Mona, Teppor; Zusinaite, Eva; Dumpis, Uga; Vitkauskiene, Astra; Cox, Rebecca Jane; Kallio-Kokko, Hannimari; Bergqvist, Anders; Tenson, Tanel; Merits, Andres; Oksenych, Valentyn; Bjørås, Magnar; Anthonsen, Marit Walbye; Shum, David H.K.; Kaarbø, Mari; Vapalahti, Olli; Windisch, Marc P; Superti-Furga, Giulio; Snijder, Berend; Kainov, Denis & Kandasamy, Richard Kumaran (2019). Common Nodes of Virus–Host Interaction Revealed Through an Integrated Network Analysis. Frontiers in Immunology.  ISSN 1664-3224.
• Ali-Ahmad, Ahmad; Bilokapic, Silvija; Schafer, Ingmar B; Halic, Mario & Sekulic, Nikolina (2019). CENP‐C unwraps the human CENP‐A nucleosome through the H2A C‐terminal tail. EMBO Reports.  ISSN 1469-221X. . doi: 10.15252/embr.201948913
• Dung, Truong Manh; Ngoc, Vo Truong Nhu; Hiep, Nguyen Hung; Khoi, Truong Dinh; Xiem, Vu Van; Chu-Dinh, Thien; Cieslar-Pobuda, Artur; Stoufi, Eleana; Show, Pau Loke; Tao, Yang; Bac, Nguyen Duy; Van Ba, Nguyen; Le, Quynh-Anh; Pham, Van-Huy & Chu, Dinh Toi (2019). Evaluation of dental arch dimensions in 12 year-old Vietnamese children - A cross-sectional study of 4565 subjects. Scientific Reports.  ISSN 2045-2322.  9(1) . doi: 10.1038/s41598-019-39710-4
• Köksal, Elif; Liese, Susanne; Kantarci, Ilayda; Olsson, Ragni; Carlson, Andreas & Gözen, Irep (2019). Nanotube-Mediated Path to Protocell Formation. ACS Nano.  ISSN 1936-0851.
• Horowitz, Viva R; Chambers, Zachary C; Gözen, Irep; Dimiduk, Thomas G & Manoharan, Vinothan N (2019). Active colloidal particles in emulsion droplets: a model system for the cytoplasm. The European Physical Journal Special Topics.  ISSN 1951-6355.  227(17), s 2413- 2424 . doi: 10.1140/epjst/e2019-800026-y Vis sammendrag

  In living cells, molecular motors create activity that enhances the diffusion of particles throughout the cytoplasm, and not just ones attached to the motors. We demonstrate initial steps toward creating artificial cells that mimic this phenomenon. Our system consists of active, Pt-coated Janus particles and passive tracers confined to emulsion droplets. We track the motion of both the active particles and passive tracers in a hydrogen peroxide solution, which serves as the fuel to drive the motion. We first show that correcting for bulk translational and rotational motion of the droplets induced by bubble formation is necessary to accurately track the particles. After drift correction, we find that the active particles show enhanced diffusion in the interior of the droplets and are not captured by the droplet interface. At the particle and hydrogen peroxide concentrations we use, we observe little coupling between the active and passive particles. We discuss the possible reasons for lack of coupling and describe ways to improve the system to more effectively mimic cytoplasmic activity.

• Leong, Yoong Kit; Show, Pau Loke; Lan, John Chi-Wei; Krishnamoorthy, Rambabu; Chu, Dinh Toi; Nagarajan, Dillirani; Yen, Hong-Wei & Chang, Jo-Shu (2019). Application of thermo-separating aqueous two-phase system in extractive bioconversion of polyhydroxyalkanoates by Cupriavidus necator H16. Bioresource Technology.  ISSN 0960-8524.  287, s 1- 5 . doi: 10.1016/j.biortech.2019.121474
• Martinecz, Antal; Clarelli, Fabrizio; Abel, Sören & Abel zur Wiesch, Pia (2019). Reaction Kinetic Models of Antibiotic Heteroresistance. International Journal of Molecular Sciences.  ISSN 1422-0067.  20(16) . doi: 10.3390/ijms20163965 Fulltekst i vitenarkiv.
• Luhr, Morten; Torgersen, Maria Lyngaas; Szalai, Paula; Hashim, Adnan; Brech, Andreas; Stärk, Judith & Engedal, Nikolai (2019). The kinase PERK and the transcription factor ATF4 play distinct and essential roles in autophagy resulting from tunicamycin-induced ER stress. Journal of Biological Chemistry.  ISSN 0021-9258.  294(20), s 8197- 8217 . doi: 10.1074/jbc.RA118.002829
• Stiksrud, Birgitte; Aass, Hans Christian Dalsbotten; Lorvik, Kristina Berg; Ueland, Thor; Trøseid, Marius & Dyrhol-Riise, Anne Ma (2019). Activated dendritic cells and monocytes in HIV immunological nonresponders: HIV-induced interferon-inducible protein-10 correlates with low future CD4+ recovery. AIDS (London).  ISSN 0269-9370.  33(7), s 1117- 1129 . doi: 10.1097/QAD.0000000000002173
• van IJzendoorn, David G.P.; Szuhai, Karoly; Briaire-De Bruijn, Inge H; Kostine, Marie; Kuijjer, Marieke Lydia & Bovée, Judith V.M.G. (2019). Machine learning analysis of gene expression data reveals novel diagnostic and prognostic biomarkers and identifies therapeutic targets for soft tissue sarcomas. PLoS Computational Biology.  ISSN 1553-734X.  15(2), s 1- 19 . doi: 10.1371/journal.pcbi.1006826
• Itkonen, Harri M; Poulose, Ninu; Walker, Suzanne & Mills, Ian Geoffrey (2019). CDK9 Inhibition Induces a Metabolic Switch that Renders Prostate Cancer Cells Dependent on Fatty Acid Oxidation. Neoplasia.  ISSN 1522-8002.  21(7), s 713- 720 . doi: 10.1016/j.neo.2019.05.001
• Banerjee, Debarshi; Cieslar-Pobuda, Artur; Zhu, Geyunjian Harry; Wiechec, Emilia & Patra, Hirak K. (2019). Adding Nanotechnology to the Metastasis Treatment Arsenal. TIPS - Trends in Pharmacological Sciences.  ISSN 0165-6147.  40(6), s 403- 418 . doi: 10.1016/j.tips.2019.04.002
• Feng, Huijuan; Bao, Suying; Rahman, Mohammad Alinoor; Weyn-Vanhentenryck, Sebastien M.; Khan, Aziz; Wong, Justin YY; Shah, Ankeeta; Flynn, Elise D.; Krainer, Adrian R. & Zhang, Chaolin (2019). Modeling RNA-Binding Protein Specificity In Vivo by Precisely Registering Protein-RNA Crosslink Sites. Molecular Cell.  ISSN 1097-2765. . doi: 10.1016/j.molcel.2019.02.002 Vis sammendrag

  RNA-binding proteins (RBPs) regulate post-transcriptional gene expression by recognizing short and degenerate sequence motifs in their target transcripts, but precisely defining their binding specificity remains challenging. Crosslinking and immunoprecipitation (CLIP) allows for mapping of the exact protein-RNA crosslink sites, which frequently reside at specific positions in RBP motifs at single-nucleotide resolution. Here, we have developed a computational method, named mCross, to jointly model RBP binding specificity while precisely registering the crosslinking position in motif sites. We applied mCross to 112 RBPs using ENCODE eCLIP data and validated the reliability of the discovered motifs by genome-wide analysis of allelic binding sites. Our analyses revealed that the prototypical SR protein SRSF1 recognizes clusters of GGA half-sites in addition to its canonical GGAGGA motif. Therefore, SRSF1 regulates splicing of a much larger repertoire of transcripts than previously appreciated, including HNRNPD and HNRNPDL, which are involved in multivalent protein assemblies and phase separation.

• Chellappa, Stalin; Kushekhar, Kushi; Munthe, Ludvig Andre; Tjønnfjord, Geir Erland; Aandahl, Einar Martin; Okkenhaug, Klaus & Tasken, Kjetil (2019). The PI3K p110δ isoform inhibitor idelalisib preferentially inhibits human regulatory T cell function. Journal of Immunology.  ISSN 0022-1767.  202(5), s 1397- 1405 . doi: 10.4049/jimmunol.1701703
• Goodridge, Jodie; Jacobs, Benedikt Marcel; Sætersmoen, Michelle Lu; Clement, Dennis; Hammer, Quirin; Clancy, Trevor; Skarpen, Ellen; Brech, Andreas; Landskron, Johannes; Grimm, Christian; Pfefferle, Aline; Meza, Leonardo Zepeda; Lorenz, Susanne; Wiiger, Merete Thune; Louch, William Edward; Ask, Eivind Heggernes; Liu, Lisa L.; Oei, Vincent Yi Sheng; Kjällquist, Una; Linnarsson, Sten; Patel, Sandip; Tasken, Kjetil; Stenmark, Harald & Malmberg, Karl-Johan (2019). Remodeling of secretory lysosomes during education tunes functional potential in NK cells. Nature Communications.  ISSN 2041-1723.  10:14, s 1- 15 . doi: 10.1038/s41467-019-08384-x
• Itkonen, Harri; Urbanucci, Alfonso; Sara ES, Martin; Khan, Aziz; Mathelier, Anthony; Thiede, Bernd; Walker, Suzanne & Mills, Ian Geoffrey (2019). High OGT activity is essential for MYC-driven proliferation of prostate cancer cells. Theranostics.  ISSN 1838-7640.  9(8), s 2183- 2197 . doi: 10.7150/thno.30834
• Engedal, Nikolai; Luhr, Morten; Szalai, Paula & Seglen, Per O. (2019). Measurement of Bulk Autophagy by a Cargo Sequestration Assay. Methods in molecular biology.  ISSN 1064-3745.  1880, s 307- 313 . doi: 10.1007/978-1-4939-8873-0_20
• Szwed, Marzena; Sønstevold, Tonje; Øverbye, Anders; Engedal, Nikolai; Grallert, Beata; Mørch, Ýrr Asbjørg; Sulheim, Einar; Iversen, Tore Geir; Skotland, Tore; Sandvig, Kirsten & Torgersen, Maria Lyngaas (2019). Small variations in nanoparticle structure dictate differential cellular stress responses and mode of cell death. Nanotoxicology.  ISSN 1743-5390.  13(6), s 761- 782 . doi: 10.1080/17435390.2019.1576238
• Khan, Aziz & Zhang, Xuegong (2019). Integrative modeling reveals key chromatin and sequence signatures predicting super-enhancers. Scientific Reports.  ISSN 2045-2322.  9(1), s 1- 15 . doi: 10.1038/s41598-019-38979-9
• Brennecke, Philip; Rasina, Dace; Aubi Catevilla, Oscar; Herzog, Katja; Landskron, Johannes; Cautain, Bastien; Vicente, Francisca; Quintana, Jordi; Mestres, Jordi; Stechmann, Bahne; Ellinger, Bernhard; Brea, Jose; Kolanowski, Jacek L.; Pilarski, Radosław; Orzáez, Mar; Pineda-Lucena, Antonio; Laraia, Luca; Nami, Faranak; Zielenkiewicz, Piotr; Paruch, Kamil; Hansen, Espen; von Kries, Jens P.; Neuenschwander, Martin; Specker, Edgar; Bartunek, Petr; Šímová, Šárka; Leśnikowski, Zbigniew; Krauss, Stefan; Lehtiö, Lari; Bilitewski, Ursula; Brönstrup, Mark; Tasken, Kjetil; Jirgensons, Aigars; Lickert, Heiko; Clausen, Mads H.; Andersen, Jeanette hammer; Vicent, Maria J.; Genilloud, Olga; Martinez, Aurora; Nazaré, Marc; Fecke, Wolfgang & Gribbon, Philip (2019). EU-OPENSCREEN: A novel collaborative approach to facilitate chemical biology. SLAS Discovery.  ISSN 2472-5552.  24(3), s 398- 413 . doi: 10.1177/2472555218816276 Fulltekst i vitenarkiv.
• Gheorghe, Marius; Sandve, Geir Kjetil; Khan, Aziz; Cheneby, Jeanne; Ballester, Benoit & Mathelier, Anthony (2019). A map of direct TF–DNA interactions in the human genome. Nucleic Acids Research.  ISSN 0305-1048.  47(4), s e21 . doi: 10.1093/nar/gky1210
• Skalleberg, Natalie Sharim; Xianbin, Yang; Babaie, Eshrat; Crystal, John Michael; Geronimo, Benedicto Abrigos; Reseland, Janne Elin; Osmundsen, Harald & Landin, Maria Augusta Dos S Silva (2019). Effects of miR-214 knockout on 214/199 cluster expression levels during mineralization of the first murine molar. PLoS Biology.  ISSN 1544-9173. Vis sammendrag

  The objectives of this study were to investigate the effects induced on the 214/199 cluster and consequently murine miRNome while miR-214 was temporarily knocked out on the first murine molar. Endogenous expression of individual microRNAs (miRNAs) of 214/199 cluster during mineralization stages was also mapped. Nucleotide alignment of miR-214 mature sequence and comparative genomics was used to find target genes for this miR during mineralization of the first murine molar. The effects of temporary knockdown of miR-214 were induced by in vivo transfection with antagomir-214 in situ at the first murine molar. The expression levels of microRNAs (miRs) were measured by real-time reverse transcription polymerase chain reaction (real-time RT-PCR) from the day of birth (P0) up to post-natal day 14 (P14). The effects of in vivo transfection with the antagomir on the mouse miRNome was assayed using oligonucleotide miRNA arrays. The levels of mRNA expression of target genes regulated, directly or indirectly, by the 214/199 cluster were measured using deoxyoligonucleotide microarrays. RT-PCR results after In vivo transfection with antagomir-214 suggest that temporarily knockout of miR-214 induces opposite responses on the levels of expression of miR-199-5p and miR-199-3p. Resulting endogenous expression levels of individual microRNAs of the cluster 214/199 suggest that miR-199-3p follows the same expression pattern as miR-214 throughout: the late bell stages (P0-P2), tooth mineralization (P3-P9) and up to tooth eruption (P14). The Bioinformatics analysis results, of murine miRNome affected by in vivo transfection with antagomir-214, suggested that downregulated miRNAs were significantly associated with cell cycle and cell proliferation. Reciprocally, upregulated miRs were significantly associated with organ development, cell death and /or cell survival. Results from nucleotide alignment of miR-214 mature sequence and comparative genomics suggested; glutamate metabotrophic reseptor 5 (Grm5), laminin beta 3(Lamb3), bromodomain containing 2 (Brd2), suppressor of cytokine signaling 7 (Socs7), methyl transferase homolog 1(Hen1), Re1- silencing transcription factor.

• Gerhauser, Clarissa; Favero, Francesco; Risch, Thomas; Simon, Ronald; Feuerbach, Lars; Assenov, Yassen; Heckmann, Doreen; Sidiropoulos, Nikos; Waszak, Sebastian M.; Hübschmann, Daniel; Urbanucci, Alfonso; Girma, Etsehiwot G.; Kuryshev, Vladimir; Klimczak, Leszek J.; Saini, Natalie; Stütz, Adrian M.; Weichenhan, Dieter; Böttcher, Lisa-Marie; Toth, Reka; Hendriksen, Josephine D.; Koop, Christina; Lutsik, Pavlo; Matzk, Sören; Warnatz, Hans-Jörg; Amstislavskiy, Vyacheslav; Feuerstein, Clarissa; Raeder, Benjamin; Bogatyrova, Olga; Schmitz, Eva-Maria; Hube-Magg, Claudia; Kluth, Martina; Huland, Hartwig; Graefen, Markus; Lawerenz, Chris; Henry, Gervaise H.; Yamaguchi, Takafumi N.; Malewska, Alicia; Meiners, Jan; Schilling, Daniela; Reisinger, Eva; Eils, Roland; Schlesner, Matthias; Strand, Douglas W.; Bristow, Robert G.; Boutros, Paul C.; von Kalle, Christof; Gordenin, Dmitry; Sültmann, Holger; Brors, Benedikt; Sauter, Guido; Plass, Christoph; Yaspo, Marie-Laure; Korbel, Jan O.; Schlomm, Thorsten & Weischenfeldt, Joachim (2018). Molecular evolution of early-onset prostate cancer identifies molecular risk markers and clinical trajectories. Cancer Cell.  ISSN 1535-6108.  34(6), s 996- 1011.e8 . doi: 10.1016/j.ccell.2018.10.016
• Roest, Gemma; Hesemans, Evelien; Welkenhuyzen, Kirsten; Luyten, Tomas; Engedal, Nikolai; Bultynck, Geert & Parys, Jan B. (2018). The ER Stress Inducer L-Azetidine-2-Carboxylic Acid Elevates the Levels of Phospho-eIF2α and of LC3-II in a Ca2+-Dependent Manner. Cells.  ISSN 2073-4409.  7(12), s 239 . doi: 10.3390/cells7120239 Fulltekst i vitenarkiv.
• Tsui, Carlson; Martínez-Martín, Nuria; Gaya, Mauro; Maldonado, Paula; Llorian, Miriam; Legrave, Nathalie M.; Rossi, Merja; MacRae, James I.; Cameron, Angus J.; Parker, Peter J.; Leitges, Michael; Bruckbauer, Andreas & Batista, Facundo D. (2018). Protein kinase C-β dictates B cell fate by regulating mitochondrial remodeling, metabolic reprogramming, and heme biosynthesis. Immunity.  ISSN 1074-7613.  48(6), s 1144- 1159.e5 . doi: 10.1016/j.immuni.2018.04.031
• Nguyen, Nga Thi Thuy; Contreras-Moreira, Bruno; Castro Mondragón, Jaime Abraham; Santana-Garcia, Walter; Ossio, Raul; Robles-Espinoza, Carla Daniela; Bahin, Mathieu; Collombet, Samuel; Vincens, Pierre; Thieffry, Denis; van Helden, Jacques; Medina-Rivera, Alejandra & Thomas-Chollier, Morgane (2018). RSAT 2018: Regulatory sequence analysis tools 20th anniversary. Nucleic Acids Research.  ISSN 0305-1048.  46(1), s W209- W214 . doi: 10.1093/nar/gky317
• Colgan, Lesley A; Hu, Mo; Misler, Jaime A; Parra-Bueno, Paula; Moran, Corey M; Leitges, Michael & Yasuda, Ryohei (2018). PKCα integrates spatiotemporally distinct Ca2+ and autocrine BDNF signaling to facilitate synaptic plasticity. Nature Neuroscience.  ISSN 1097-6256.  21(8), s 1027- 1037 . doi: 10.1038/s41593-018-0184-3
• Aourz, Najat; Serruys, Ann-Sophie K.; Chabwine, Joelle N.; Balegamire, Pascal Byenda; Afrikanova, Tatiana; Edrada-Ebel, RuAngelie; Grey, Alexander I.; Kamuhabwa, Appolinary R.; Walrave, Laura; Esguerra, Camila V.; van Leuven, Fred; De Witte, Peter A.M.; Smolders, Ilse & Crawford, Alexander D. (2018). Identification of GSK‑3 as a Potential Therapeutic Entry Point for Epilepsy. ACS Chemical Neuroscience.  ISSN 1948-7193. . doi: 10.1021/acschemneuro.8b00281
• Fornes, Oriol; Gheorghe, Marius; Richmond, Phillip A.; Arenillas, David J.; Wasserman, Wyeth W. & Mathelier, Anthony (2018). MANTA2, update of the Mongo database for the analysis of transcription factor binding site alterations. Scientific Data.  ISSN 2052-4463.  5:180141, s 1- 7 . doi: 10.1038/sdata.2018.141
• Hermansen, Johanne Uthus; Tjønnfjord, Geir Erland; Munthe, Ludvig Andre; Tasken, Kjetil & Skånland, Sigrid Strand (2018). Cryopreservation of primary B cells minimally influences their signaling responses. Scientific Reports.  ISSN 2045-2322.  8:17651, s 1- 7 . doi: 10.1038/s41598-018-36121-9 Fulltekst i vitenarkiv.
• Wang, Shixiong; Singh, Sachin Kumar; Madhumohan, Katika; Lopez-Aviles, Sandra & Rodriguez, Antoni Hurtado (2018). High Throughput Chemical Screening Reveals Multiple Regulatory Proteins on FOXA1 in Breast Cancer Cell Lines. International Journal of Molecular Sciences.  ISSN 1422-0067.  19(4123) . doi: 10.3390/ijms19124123
• Distefano, Marita Borg; Haugen, Linda Hofstad; Wang, Yan; Perdreau-Dahl, Harmonie; Kjos, Ingrid; Jia, Da; Morth, Jens Preben; Neefjes, Jacques; Bakke, Oddmund & Progida, Cinzia (2018). TBC1D5 controls the GTPase cycle of Rab7b. Journal of Cell Science.  ISSN 0021-9533.  131(17), s 1- 13 . doi: 10.1242/jcs.216630
• Ngoc, Vo Truong Nhu; Duong, Nguyen Thuy; Chu, Dinh Toi; Hang, Luong M; Viet, Do H; Duc, Nguyen M; Anh, Le Quynh; Son, Tong M; Van Can, Do & Nga, Vu T (2018). Clinical, radiographic, and genetic characteristics of hypohidrotic ectodermal dysplasia: A cross-sectional study. Clinical Genetics.  ISSN 0009-9163.  94(5), s 484- 486 . doi: 10.1111/cge.13435
• Lecellier, Charles-Henri; Wasserman, Wyeth W. & Mathelier, Anthony (2018). Human enhancers harboring specific sequence composition, activity, and genome organization are linked to the immune response. Genetics.  ISSN 0016-6731.  209(4), s 1055- 1071 . doi: 10.1534/genetics.118.301116
• Dueland, Svein; Line, Pål Dag; Hagness, Morten; Foss, Aksel & Andersen, Marit Helen (2018). Long‐term quality of life after liver transplantation for non‐resectable colorectal metastases confined to the liver. JBJS Open Access.  ISSN 2472-7245. . doi: 10.1002/bjs5.50116 Fulltekst i vitenarkiv.
• Grimolizzi, Franco & Arranz, Lorena (2018). Multiple faces of succinate beyond metabolism in blood. Haematologica.  ISSN 0390-6078.  103(10), s 1586- 1592 . doi: 10.3324/haematol.2018.196097 Fulltekst i vitenarkiv.
• Richter, Lisa Maria; Landsverk, Ole J. B.; Atlasy, Nader; Bujko, Anna; Yaqub, Sheraz; Horneland, Rune; Øyen, Ole; Aandahl, Einar Martin; Lundin, Knut Erik Aslaksen; Stunnenberg, Hendrik G.; Bækkevold, Espen Sønderaal & Jahnsen, Frode Lars (2018). Transcriptional profiling reveals monocyte-related macrophages phenotypically resembling DC in human intestine. Mucosal Immunology.  ISSN 1933-0219.  11(5), s 1512- 1523 . doi: 10.1038/s41385-018-0060-1 Fulltekst i vitenarkiv.
• Sommer, Theis; Bjerregaard-Andersen, Kaare; Uribe, Lalita; Etzerodt, Michael; Diezemann, Gregor; Gauss, Jürgen; Cascella, Michele & Morth, Jens Preben (2018). A fundamental catalytic difference between zinc and manganese dependent enzymes revealed in a bacterial isatin hydrolase. Scientific Reports.  ISSN 2045-2322.  8(13104), s 1- 11 . doi: 10.1038/s41598-018-31259-y
• Szalai, Paula; Parys, Jan B; Bultynck, Geert; Christensen, Søren Brøgger; Nissen, Poul; Møller, Jesper Vuust & Engedal, Nikolai (2018). Nonlinear relationship between ER Ca2+ depletion versus induction of the unfolded protein response, autophagy inhibition, and cell death. Cell Calcium.  ISSN 0143-4160.  76, s 48- 61 . doi: 10.1016/j.ceca.2018.09.005 Fulltekst i vitenarkiv.
• Mauthe, Mario; Orhon, Idil; Rocchi, Cecilia; Zhou, Xingdong; Luhr, Morten; Hijlkema, Kerst-Jan; Coppes, Robert P.; Engedal, Nikolai; Mari, Muriel & Reggiori, Fulvio (2018). Chloroquine inhibits autophagic flux by decreasing autophagosome-lysosome fusion. Autophagy.  ISSN 1554-8627.  14(8), s 1435- 1455 . doi: 10.1080/15548627.2018.1474314
• Luhr, Morten; Szalai, Paula & Engedal, Nikolai (2018). The Lactate Dehydrogenase Sequestration Assay - A Simple and Reliable Method to Determine Bulk Autophagic Sequestration Activity in Mammalian Cells. Journal of Visualized Experiments.  ISSN 1940-087X.  137(137) . doi: 10.3791/57971 Fulltekst i vitenarkiv.
• Szalai, Paula & Engedal, Nikolai (2018). An Image-based Assay for High-throughput Analysis of Cell Proliferation and Cell Death of Adherent Cells. Bio-protocol.  ISSN 2331-8325.  8(9) . doi: 10.21769/BioProtoc.2835
• Luhr, Morten; Sætre, Frank Ove & Engedal, Nikolai (2018). The Long-lived Protein Degradation Assay: an efficient method for Quantitative Determination of the Autophagic Flux of Endogenous Proteins in adherent cell lines. Bio-protocol.  ISSN 2331-8325.  8(9) . doi: 10.21769/BioProtoc.2836
• Engedal, Nikolai; Žerovnik, Eva; Rudov, Alexander; Galli, Francesco; Olivieri, Fabiola; Procopio, Antonio Domenico; Rippo, Maria Rita; Monsurrò, Vladia; Betti, Michele & Albertini, Maria Cristina (2018). From Oxidative Stress Damage to Pathways, Networks, and Autophagy via MicroRNAs. Oxidative Medicine and Cellular Longevity.  ISSN 1942-0900.  2018, s 4968321 . doi: 10.1155/2018/4968321 Fulltekst i vitenarkiv.
• Konieczny, Joanna & Arranz, Lorena (2018). Updates on old and weary haematopoiesis. International Journal of Molecular Sciences.  ISSN 1422-0067.  19:2567(9), s 1- 14 . doi: 10.3390/ijms19092567 Fulltekst i vitenarkiv.
• Khan, Aziz; Mathelier, Anthony & Zhang, Xuegong (2018). Super-enhancers are transcriptionally more active and cell type-specific than stretch enhancers. Epigenetics.  ISSN 1559-2294.  13(9), s 910- 922 . doi: 10.1080/15592294.2018.1514231
• Khan, Aziz & Zhang, Xuegong (2018). Making genome browsers portable and personal. Genome Biology.  ISSN 1465-6906.  19(93) . doi: 10.1186/s13059-018-1470-9 Vis sammendrag

  GIVE is a framework and library for creating portable and personalized genome browsers. It makes visualizing genomic data as easy as building a laboratory homepage.

• Rogne, Marie; Svärd, Oksana; Madsen-Østerbye, Julia-Kristina Jensen; Hashim, Adnan; Tjønnfjord, Geir Erland & Staerk, Judith (2018). Cytokinesis arrest and multiple centrosomes in B cell chronic lymphocytic leukaemia. Journal of Cellular and Molecular Medicine.  ISSN 1582-1838.  22(5), s 2846- 2855 . doi: 10.1111/jcmm.13579
• Rogne, Marie; Chu, Dinh Toi; Küntziger, Thomas M.; Mylonakou, Maria-Niki; Collas, Philippe & Tasken, Kjetil (2018). OPA1-anchored PKA phosphorylates perilipin 1 on S522 and S497 in adipocytes differentiated from human adipose stem cells. Molecular Biology of the Cell.  ISSN 1059-1524.  29(12), s 1487- 1501 . doi: 10.1091/mbc.E17-09-0538
• Schwab, Charlotte; Gabrysch, Annemarie; Olbrich, Peter; Patiño, Virginia; Warnatz, Klaus; Wolff, Daniel; Hoshino, Akihiro; Kobayashi, Masao; Imai, Kohsuke; Takagi, Masatoshi; Dybedal, Ingunn; Haddock, Jamanda A.; Sansom, David M.; Lucena, Jose M.; Seidl, Maximilian; Schmitt-Graeff, Annette; Reiser, Veronika; Emmerich, Florian; Frede, Natalie; Bulashevska, Alla; Salzer, Ulrich; Schubert, Desirée; Hayakawa, Seiichi; Okada, Satoshi; Kanariou, Maria; Kucuk, Zeynep Yesim; Chapdelaine, Hugo; Petruzelkova, Lenka; Sumnik, Zdenek; Sediva, Anna; Slatter, Mary; Arkwright, Peter D.; Cant, Andrew; Lorenz, Hanns-Martin; Giese, Thomas; Lougaris, Vassilios; Plebani, Alessandro; Price, Christina; Sullivan, Kathleen E.; Moutschen, Michel; Litzman, Jiří; Freiberger, Tomas; van de Veerdonk, Frank L.; Recher, Mike; Albert, Michael H.; Hauck, Fabian; Seneviratne, Suranjith; Pachlopnik Schmid, Jana; Kolios, Antonios; Unglik, Gary; Klemann, Christian; Speckmann, Carsten; Ehl, Stephan; Leichtner, Alan; Blumberg, Richard; Franke, Andre; Snapper, Scott; Zeissig, Sebastian; Cunningham-Rundles, Charlotte; Giulino-Roth, Lisa; Elemento, Olivier; Dückers, Gregor; Niehues, Tim; Fronkova, Eva; Kanderová, Veronika; Platt, Craig D.; Chou, Janet; Chatila, Talal A.; Geha, Raif; McDermott, Elizabeth; Bunn, Su; Kurzai, Monika; Schulz, Ansgar; Alsina, Laia; Casals, Ferran; Deyà-Martinez, Angela; Hambleton, Sophie; Kanegane, Hirokazu; Tasken, Kjetil; Neth, Olaf & Grimbacher, Bodo (2018). Phenotype, penetrance, and treatment of 133 cytotoxic T-lymphocyte antigen 4-insufficient subjects. Journal of Allergy and Clinical Immunology.  ISSN 0091-6749.  s 1- 15 . doi: 10.1016/j.jaci.2018.02.055 Fulltekst i vitenarkiv.
• Pajares, Marta; Cuadrado, A.; Engedal, Nikolai; Jirsova, Z. & Cahova, M (2018). The role of free radicals in autophagy regulation: Implications for ageing. Oxidative Medicine and Cellular Longevity.  ISSN 1942-0900. . doi: 10.1155/2018/2450748 Fulltekst i vitenarkiv.
• Sugiaman-Trapman, Debora; Vitezic, Morana; Jouhilahti, Eeva-Mari; Mathelier, Anthony; Lauter, Gilbert; Misra, Sougat; Daub, Carsten O.; Kere, Juha & Swoboda, Peter (2018). Characterization of the human RFX transcription factor family by regulatory and target gene analysis. BMC Genomics.  ISSN 1471-2164.  19(181) . doi: 10.1186/s12864-018-4564-6
• Vorhagen, Susanne; Kleefisch, Dominik; Persa, Oana-Diana; Graband, Annika; Schwickert, Alexandra; Saynisch, Michael; Leitges, Michael; Niessen, Carien M. & Iden, Sandra (2018). Shared and independent functions of aPKC? and Par3 in skin tumorigenesis. Oncogene.  ISSN 0950-9232.  37, s 5136- 5146 . doi: 10.1038/s41388-018-0313-1
• Ngoc, Vo Truong Nhu; Huong, Le Thi; van Nhon, Bui; Tan, Ngo Thi Minh; van Thuc, Pham; Hien, Vo Thi Thu; Dung, Truong Manh; van Toan, Ngo; Anh, Le Quynh; Son, Le Hoang; Chu-Dinh, Thien & Chu, Dinh Toi (2018). The higher prevalence of developmental defects of enamel in the dioxin-affected region than non-dioxin-affected region: result from a cross-sectional study in Vietnam. Odontology : official journal of The Society of the Nippon Dental University.  ISSN 1618-1247.  s 1- 6 . doi: 10.1007/s10266-018-0358-1
• Vdovikova, Svitlana; Gilfillan, Siv; Wang, Shixiong; Dongre, Mitesh; Wai, Sun Nyunt & Rodriguez, Antoni Hurtado (2018). Modulation of gene transcription and epigenetics of colon carcinoma cells by bacterial membrane vesicles. Scientific Reports.  ISSN 2045-2322.  8(1) . doi: 10.1038/s41598-018-25308-9
• Nordheim, Espen; Horneland, Rune; Aandahl, Einar Martin; Grzyb, Krzysztof; Aabakken, Lars; Paulsen, Vemund; Midtvedt, Karsten; Hartmann, Anders & Jenssen, Trond Geir (2018). Pancreas transplant rejection episodes are not revealed by biopsies of the donor duodenum in a prospective study with paired biopsies. American Journal of Transplantation.  ISSN 1600-6135.  18(5), s 1256- 1261 . doi: 10.1111/ajt.14658
• Myhrvold, Ida Kristin; Cremaschi, Andrea; Hermansen, Johanne Uthus; Tjønnfjord, Geir Erland; Munthe, Ludvig Andre; Tasken, Kjetil & Skånland, Sigrid Strand (2018). Single cell profiling of phospho-protein levels in chronic lymphocytic leukemia. OncoTarget.  ISSN 1949-2553.  9(10), s 9273- 9284 . doi: 10.18632/oncotarget.23949 Fulltekst i vitenarkiv.
• Bernal Mera, Aurora & Arranz, Lorena (2018). Nestin-expressing progenitor cells: function, identity and therapeutic implications. Cellular and Molecular Life Sciences (CMLS).  ISSN 1420-682X.  75(12), s 2177- 2195 . doi: 10.1007/s00018-018-2794-z Fulltekst i vitenarkiv.
• Zuber, Verena; Jönsson, Erik Gunnar; Frei, Oleksandr; Witoelar, Aree; Thompson, Wesley Kurt; Schork, Andrew J.; Bettella, Francesco; Wang, Yunpeng; Djurovic, Srdjan; Smeland, Olav Bjerkehagen; Dieset, Ingrid; Fanous, Ayman H.; Desikan, Rahul S; Küry, Sébastien; Bézieau, Stéphane; Dale, Anders; Mills, Ian Geoffrey & Andreassen, Ole Andreas (2018). Identification of shared genetic variants between schizophrenia and lung cancer. Scientific Reports.  ISSN 2045-2322.  674(8), s 1- 8 . doi: 10.1038/s41598-017-16481-4 Fulltekst i vitenarkiv.
• Uribe, Lalita; Diezemann, Gregor; Gauss, Jürgen; Morth, Jens Preben & Cascella, Michele (2018). Structural origin of metal specificity in isatin hydrolase from Labrenzia aggregata investigated by computer simulations. Chemistry - A European Journal.  ISSN 0947-6539.  24(20), s 5074- 5077 . doi: 10.1002/chem.201705159
• Thimiri Govinda Raj, Deepak Balaji & Khan, Ali (2018). Protocol for eukaryotic plasma membrane isolation using superparamagnetic nanoparticles. Journal of Magnetism and Magnetic Materials.  ISSN 0304-8853.  476, s 628- 631 . doi: 10.1016/j.jmmm.2017.12.070 Vis sammendrag

  Superparamagnetic nanoparticles (SPMNP) are used in cell biology for various applications such as subcellular fractionation and for high pure organelle isolation. We simplified previously established methodology with the use of SPMNP for isolation of high pure and high yield plasma membrane from adherent eukaryotic cell line (Thimiri Govinda Raj et al., 2011, 2012, 2016; Tharkeshwar et al., 2014). Here, we show a step by step protocol for SPMNP based plasma membrane fractionation. Our research thus could be used as an alternative method to isolate plasma membrane fraction for cell biology, system biology and immunology research. Keywords Superparamagnetic nanoparticles (SPMNP)Plasma membraneEndosomesLysosomesCationic silica based fractionation

• Chen, Haitao; Ewing, Charles M; Zheng, Sigun; Grindedal, Eli Marie; Cooney, Kathleen A.; Wiley, Kathleen E.; Djurovic, Srdjan; Andreassen, Ole Andreas; Axcrona, Karol; Mills, Ian Geoffrey; Xu, Jianfeng; Mæhle, Lovise Olaug; Fosså, Sophie Dorothea & Isaacs, William B. (2018). Genetic factors influencing prostate cancer risk in Norwegian men. The Prostate.  ISSN 0270-4137.  78(3), s 186- 192 . doi: 10.1002/pros.23453 Fulltekst i vitenarkiv.
• Dugarte, Maria Eugenia Chollet; Andersen, Elisabeth; Skarpen, Ellen; Myklebust, Christiane Filion; Koehler, Christian; Morth, Jens Preben; Chuansumrit, Ampaiwan; Pinotti, Mirko; Bernardi, Francesco; Thiede, Bernd; Sandset, Per Morten & Skretting, Grethe (2018). Factor VII deficiency: Unveiling the cellular and molecular mechanisms underlying Three model alterations of the enzyme catalytic domain. Biochimica et Biophysica Acta - Molecular Basis of Disease.  ISSN 0925-4439.  1864(3), s 660- 667 . doi: 10.1016/j.bbadis.2017.12.016
• Lindahl, Jørn Petter Hanto; Horneland, Rune; Nordheim, Espen; Hartmann, Anders; Aandahl, Einar Martin; Grzyb, Krzysztof; Haugaa, Håkon; Kjøsen, Gisle; Åsberg, Anders & Jenssen, Trond Geir (2018). Outcomes in Pancreas Transplantation With Exocrine Drainage Through a Duodenoduodenostomy Versus Duodenojejunostomy. American Journal of Transplantation.  ISSN 1600-6135.  18(1), s 154- 162 . doi: 10.1111/ajt.14420 Fulltekst i vitenarkiv.
• Luhr, Morten; Szalai, Paula; Sætre, Frank; Gerner, Lisa; Seglen, Per O. & Engedal, Nikolai (2017). A simple cargo sequestration assay for quantitative measurement of non-selective autophagy in cultured cells. Methods in Enzymology.  ISSN 0076-6879.  587, s 351- 364 . doi: 10.1016/bs.mie.2016.09.064
• Sehgal, Pankaj; Szalai, Paula; Olesen, Claus; Praetorius, Helle A.; Nissen, Poul; Christensen, Søren Brøgger; Engedal, Nikolai & Møller, Jesper Vuust (2017). Inhibition of the sarco/endoplasmic reticulum (ER) Ca2+-ATPase by thapsigargin analogs induces cell death via ER Ca2+ depletion and the unfolded protein response. Journal of Biological Chemistry.  ISSN 0021-9258.  292(48), s 19656- 19673 . doi: 10.1074/jbc.M117.796920

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• Ahrens, Theresa Dorothee; Caglayan, Safak; Staerk, Judith & Cieslar-Pobuda, Artur (2018). Transdifferentiation – changing cell identity. Academic Press.  ISBN 9780128122785.  249 s.
• Caglayan, Safak; Ahrens, Theresa Dorothee; Cieslar-Pobuda, Artur & Staerk, Judith (2018). Modern ways of obtaining stem cells. Academic Press.  ISBN 9780128122785.  249 s.

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• Haug, Markus; Meås, Hany Zakaria; Beckwith, Marianne Sandvold; Louet, Claire; Ryan, Liv; Hu, Z.; Landskron, Johannes; Nordbø, Svein Arne; Tasken, Kjetil; Yin, H. H.; Damås, Jan Kristian & Flo, Trude Helen (2019). P1511 - Sensing of HIV-1 nucleic acids by TLR8 in human CD4+ T cells. European Journal of Immunology.  ISSN 0014-2980.  43, s 1- 2223 . doi: https://doi.org/10.1002/eji.201970400
• Bösl, Korbinian; Ianevski, Aleksandr; Than, Thoa T.; Andersen, Petter I.; Kuivanen, Suvi; Mona, Teppor; Zusinaite, Eva; Dumpis, Uga; Vitkauskiene, Astra; Cox, Rebecca J.; Kallio-Kokko, Hannimari; Bergqvist, Anders; Tenson, Tanel; Merits, Andres; Oksenych, Valentyn; Bjørås, Magnar; Anthonsen, Marit Walbye; Shum, David H.K.; Kaarbø, Mari; Vapalahti, Olli; Windisch, Marc P; Superti-Furga, Giulio; Snijder, Berend; Kainov, Denis & Kandasamy, Richard Kumaran (2019). Critical Nodes of Virus–Host Interaction Revealed Through an Integrated Network Analysis.
• Meås, Hany Zakaria; Haug, Markus; Beckwith, Marianne; Louet, Claire; Ryan, Liv; Landskron, Johannes; Nordbø, Svein Arne; Tasken, Kjetil; Damås, Jan Kristian & Flo, Trude Helen (2019). Sensing of HIV-1 by TLR8 activates human T cells and reverses Latency.
• Bösl, Korbinian; Ianevski, Aleksandr; Than, Thoa T.; Andersen, Petter I.; Teppor, Mona; Zusinaite, Eva; Dumpis, Uga; Vitkauskiene, Astra; Cox, Rebecca Jane; Kallio-Kokko, Hannimari; Bergqvist, Anders; Tenson, Tanel; Merits, Andres; Oksenych, Valentyn; Bjørås, Magnar; Anthonsen, Marit Walbye; Shum, David H.K.; Kaarbø, Mari; Windisch, Marc P.; Superti-Furga, Giulio; Snijder, Berend; Kainov, Denis & Kandasamy, Richard Kumaran (2019). Critical Nodes of Viral Modulation Revealed Through an Integrated Network Analysis of Host-Virus Interaction Landscape.
• Fan, Qiong; Nørgaard, Rikke Christine; Grytten, Ivar; Ulven, Stine Marie; Lucas, Christin; Bindesbøll, Christian; Lemma, Roza Berhanu; Gabrielsen, Odd Stokke; Grønning-Wang, Line Mariann; Nebb, Hilde Irene & Sæther, Thomas (2018). LXRα interacts with the glucose-sensing transcription factor ChREBPα and increases its transcriptional activity.
• Luecke, Hartmut (2018). Structure, function, and inhibitors of the Helicobacter pylori acid acclimation system, an essential component for chronic infection.
• Luecke, Hartmut (2018). Cryo EM.
• Luecke, Hartmut (2018). Membrane protein crystallization.
• Luecke, Hartmut (2018). Structure, function, and inhibitors of the Helicobacter pylori acid acclimation system, an essential component for chronic infection.
• Luecke, Hartmut (2018). Structure, function, and inhibitors of the Helicobacter pylori acid acclimation system, an essential component for chronic infection.
• Luecke, Hartmut (2018). Structure, function, and inhibitors of the Helicobacter pylori acid acclimation system, an essential component for chronic infection.
• Luecke, Hartmut (2018). Membrane protein crystallization.
• Luecke, Hartmut (2018). Helicobacter Pylori pH Acclimation: The Evil Duo of a pH-Gated Urea Channel and a Cytoplasmic Urease.
• Luecke, Hartmut (2018). The Evil Duo of a pH-Gated Urea Channel and a Cytoplasmic Urease.
• Luecke, Hartmut (2018). Survival of Helicobacter pylori at pH 1 in the stomach.
• Meås, Hany Zakaria; Haug, Markus; Beckwith, Marianne; Louet, Claire; Ryan, Liv; Landskron, Johannes; Nordbø, Svein Arne; Tasken, Kjetil; Damås, Jan Kristian & Flo, Trude Helen (2018). Sensing of HIV-1 by TLR8 activates human T cells and reverses Latency.
• Torgersen, Maria Lyngaas; Szwed, Marzena; Sønstevold, Tonje; Øverbye, Anders; Engedal, Nikolai; Grallert, Beata; Mørch, Ýrr Asbjørg; Sulheim, Einar; Iversen, Tore Geir; Skotland, Tore & Sandvig, Kirsten (2018). Small variations in nanoparticle structure dictate differential cellular stress responses and mode of cell death.
• Tasken, Kjetil (2018). Personalised Cancer Therapies (PerCaThe) – the biological perspectives.
• Tasken, Kjetil (2018). Need for competence and cross-disciplinary efforts between research and clinic in development of precision medicine strategies.
• Albertini, Maria Cristina; Proikas-Cezanne, Tassula; Engedal, Nikolai; Žerovnik, Eva & Lane, Jon D (2018). Transautophagy: Research and Translation of Autophagy Knowledge. Oxidative Medicine and Cellular Longevity.  ISSN 1942-0900. . doi: 10.1155/2018/7504165
• Vehus, Tore; Wilson, Steven Ray Haakon; Lundanes, Elsa; Krauss, Stefan; Halvorsen, Trine Grønhaug & Morth, Jens Preben (2018). Nano Liquid Chromatography-Tandem Mass Spectrometry Platforms for Determination of Low Abundant Wnt/Beta-Catenin Proteins in Cancer Research. Series of dissertations submitted to the Faculty of Mathematics and Natural Sciences, University of Oslo.. 1962.
• Khan, Aziz; Montenegro-Montero, Alejandro & Mathelier, Anthony (2018). Put science first and formatting later. EMBO Reports.  ISSN 1469-221X. . doi: 10.15252/embr.201845731
• Trunk, Thomas; Morth, Jens Preben; Slade, Daniel; Casasanta, Michael & Leo, Jack Christopher (2018). COMPARISON AND ENZYMATIC CHARACTERIZATION OF TYPE VD PATATIN-LIKE LIPASES.
• Awuh, Jane Atesoh & Flo, Trude Helen (2018). Erratum to: Molecular basis of mycobacterial survival in macrophages (Cellular and Molecular Life Sciences, (2017), 74, 9, (1625-1648), 10.1007/s00018-016-2422-8). Cellular and Molecular Life Sciences (CMLS).  ISSN 1420-682X.  75(1), s 161- 161 . doi: 10.1007/s00018-017-2683-x
• Niemiec, Maria J.; Grumaz, Christian; Ermert, David; Desel, Christine; Shankar, Madhu; Lopes, José Pedro; Mills, Ian Geoffrey; Stevens, Philip; Sohn, Kai & Urban, Constantin F. (2017). Erratum: Dual transcriptome of the immediate neutrophil and Candida albicans interplay. [BMC Genomics. 18, (2017) (696)] DOI: 10.1186/s12864-017-4097-4. BMC Genomics.  ISSN 1471-2164.  18:863, s 1- 21 . doi: 10.1186/s12864-017-4207-3
• Ross-Adams, Helen; Lamb, Alastair D.; Dunning, Mark J.; Halim, Silvia; Lindberg, Johan; Massie, Charles M.; Egevad, Lars A.; Russell, Roslin; Ramos-Montoya, Antonio; Vowler, Sarah L.; Sharma, Naomi Laura; Kay, Jonathan; Whitaker, Hayley; Clark, Jeremy P.; Hurst, Rachel; Gnanapragasam, Vincent J.; Shah, Nimish C.; Warren, Anne Yvonne; Cooper, Colin S.; Lynch, Andy G.; Stark, Rory; Mills, Ian Geoffrey; Grönberg, Henrik & Neal, David E. (2017). Corrigendum to "Integration of copy number and transcriptomics provides risk stratification in prostate cancer: A discovery and validation cohort study" [EBioMedicine 2 (9) (2015) 1133-1144] (S2352396415300712) (10.1016/j.ebiom.2015.07.017)). EBioMedicine.  ISSN 2352-3964.  17, s 238- 238 . doi: 10.1016/j.ebiom.2017.03.010
• Cieslar-Pobuda, Artur; Yue, Jianbo; Lee, Hsin-Chen; Skonieczna, Magdalena & Wei, Yau-Huei (2017). ROS and oxidative stress in stem cells. Oxidative Medicine and Cellular Longevity.  ISSN 1942-0900.  2017:5047168, s 1- 2 . doi: 10.1155/2017/5047168

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